Mercurial > repos > shellac > guppy_basecaller
annotate env/lib/python3.7/site-packages/cwltool/cwlNodeEngineJSConsole.js @ 3:758bc20232e8 draft
"planemo upload commit 2a0fe2cc28b09e101d37293e53e82f61762262ec"
| author | shellac |
|---|---|
| date | Thu, 14 May 2020 16:20:52 -0400 |
| parents | 26e78fe6e8c4 |
| children |
| rev | line source |
|---|---|
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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1 "use strict"; |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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2 function js_console_log(){ |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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3 console.error("[log] "+require("util").format.apply(this, arguments).split("\n").join("\n[log] ")); |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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4 } |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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5 function js_console_err(){ |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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6 console.error("[err] "+require("util").format.apply(this, arguments).split("\n").join("\n[err] ")); |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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7 } |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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8 process.stdin.setEncoding("utf8"); |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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9 var incoming = ""; |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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10 process.stdin.on("data", function(chunk) { |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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11 incoming += chunk; |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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12 var i = incoming.indexOf("\n"); |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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13 if (i > -1) { |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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14 try{ |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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15 var fn = JSON.parse(incoming.substr(0, i)); |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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16 incoming = incoming.substr(i+1); |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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17 process.stdout.write(JSON.stringify(require("vm").runInNewContext(fn, { |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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18 console: { |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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19 log: js_console_log, |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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20 error: js_console_err |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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21 } |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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22 })) + "\n"); |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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23 } |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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24 catch(e){ |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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25 console.error(e) |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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26 } |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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27 /*strings to indicate the process has finished*/ |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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28 console.log("r1cepzbhUTxtykz5XTC4"); |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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29 console.error("r1cepzbhUTxtykz5XTC4"); |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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30 } |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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31 }); |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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32 process.stdin.on("end", process.exit); |
