Mercurial > repos > shellac > guppy_basecaller
annotate env/lib/python3.7/site-packages/pyaml/__main__.py @ 3:758bc20232e8 draft
"planemo upload commit 2a0fe2cc28b09e101d37293e53e82f61762262ec"
| author | shellac |
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| date | Thu, 14 May 2020 16:20:52 -0400 |
| parents | 26e78fe6e8c4 |
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| rev | line source |
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26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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1 # -*- coding: utf-8 -*- |
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2 |
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26e78fe6e8c4
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3 import os, sys, stat, tempfile, contextlib, yaml, pyaml |
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4 |
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5 |
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26e78fe6e8c4
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6 @contextlib.contextmanager |
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7 def safe_replacement(path, *open_args, **open_kws): |
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8 path = str(path) |
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9 try: mode = stat.S_IMODE(os.stat(path).st_mode) |
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10 except (OSError, IOError): mode = None |
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26e78fe6e8c4
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11 open_kws.update( delete=False, |
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12 dir=os.path.dirname(path), prefix=os.path.basename(path)+'.' ) |
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13 with tempfile.NamedTemporaryFile(*open_args, **open_kws) as tmp: |
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26e78fe6e8c4
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14 try: |
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26e78fe6e8c4
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15 if mode is not None: os.fchmod(tmp.fileno(), mode) |
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26e78fe6e8c4
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16 yield tmp |
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26e78fe6e8c4
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17 if not tmp.closed: tmp.flush() |
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26e78fe6e8c4
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18 os.rename(tmp.name, path) |
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26e78fe6e8c4
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19 finally: |
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26e78fe6e8c4
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20 try: os.unlink(tmp.name) |
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26e78fe6e8c4
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21 except (OSError, IOError): pass |
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22 |
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23 |
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24 def main(argv=None): |
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25 import argparse |
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26 parser = argparse.ArgumentParser( |
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27 description='Process and dump prettified YAML to stdout.') |
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28 parser.add_argument('path', nargs='?', metavar='path', |
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29 help='Path to YAML to read (default: use stdin).') |
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30 parser.add_argument('-r', '--replace', action='store_true', |
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31 help='Replace specified path with prettified version in-place.') |
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32 parser.add_argument('-w', '--width', type=int, metavar='chars', |
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33 help='Max line width hint to pass to pyyaml for the dump.' |
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34 ' Only used to format scalars and collections (e.g. lists).') |
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35 opts = parser.parse_args(argv or sys.argv[1:]) |
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36 |
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37 src = open(opts.path) if opts.path else sys.stdin |
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38 try: data = yaml.safe_load(src) |
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39 finally: src.close() |
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26e78fe6e8c4
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40 |
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26e78fe6e8c4
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41 pyaml_kwargs = dict() |
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26e78fe6e8c4
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42 if opts.width: pyaml_kwargs['width'] = opts.width |
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26e78fe6e8c4
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43 if opts.replace and opts.path: |
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26e78fe6e8c4
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44 with safe_replacement(opts.path) as tmp: |
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26e78fe6e8c4
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45 pyaml.pprint(data, file=tmp, **pyaml_kwargs) |
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46 else: pyaml.pprint(data, **pyaml_kwargs) |
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47 |
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48 if __name__ == '__main__': sys.exit(main()) |
