Mercurial > repos > shellac > guppy_basecaller
diff env/lib/python3.7/site-packages/bioblend/_tests/CloudmanTestBase.py @ 0:26e78fe6e8c4 draft
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
| author | shellac |
|---|---|
| date | Sat, 02 May 2020 07:14:21 -0400 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/env/lib/python3.7/site-packages/bioblend/_tests/CloudmanTestBase.py Sat May 02 07:14:21 2020 -0400 @@ -0,0 +1,68 @@ +""" +Tests the functionality of the Blend CloudMan API. These tests require working +credentials to supported cloud infrastructure. +""" +import os + +from bioblend.util import Bunch +from . import test_util +from .test_util import unittest + + +class CloudmanTestBase(unittest.TestCase): + + @classmethod + @test_util.skip_unless_cloudman() + def setUpClass(cls): + if os.environ.get('BIOBLEND_CLOUD_TYPE') == 'EC2': + cls.access_key = os.environ['BIOBLEND_ACCESS_KEY'] + cls.secret_key = os.environ['BIOBLEND_SECRET_KEY'] + cls.cluster_name = 'Blend CloudMan' + cls.ami_id = os.environ['BIOBLEND_AMI_ID'] + cls.instance_type = 'm1.small' + cls.password = 'password' + cls.cloud_metadata = Bunch( + id='1', # for compatibility w/ DB representation + name="Amazon", + cloud_type="ec2", + bucket_default="cloudman", + region_name="us-east-1", + region_endpoint="ec2.amazonaws.com", + ec2_port="", + ec2_conn_path="/", + cidr_range="", + is_secure=True, + s3_host="s3.amazonaws.com", + s3_port="", + s3_conn_path='/') + else: + # Assume OpenStack/NeCTAR + cls.access_key = os.environ['BIOBLEND_ACCESS_KEY'] + cls.secret_key = os.environ['BIOBLEND_SECRET_KEY'] + cls.cloud_metadata = Bunch( + id='-1', + name="NeCTAR", + cloud_type='openstack', + bucket_default='cloudman-os', + region_name='melbourne', + region_endpoint='nova.rc.nectar.org.au', + ec2_port=8773, + ec2_conn_path='/services/Cloud', + cidr_range='115.146.92.0/22', + is_secure=True, + s3_host='swift.rc.nectar.org.au', + s3_port=8888, + s3_conn_path='/') + cls.cluster_name = 'Blend CloudMan' + cls.ami_id = os.environ['BIOBLEND_AMI_ID'] + cls.instance_type = 'm1.small' + cls.password = 'password' + + @classmethod + @test_util.skip_unless_cloudman() + def tearDownClass(cls): + try: + # TODO: cloudman's terminate method has a bug. Needs fix + cls.cmi.terminate(delete_cluster=True) + except Exception: + pass
