diff env/lib/python3.7/site-packages/bioblend/__init__.py @ 5:9b1c78e6ba9c draft default tip

"planemo upload commit 6c0a8142489327ece472c84e558c47da711a9142"

--- a/env/lib/python3.7/site-packages/bioblend/__init__.py	Thu May 14 16:47:39 2020 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,101 +0,0 @@
-import logging
-import os
-
-from bioblend.config import BioBlendConfigLocations, Config
-
-# Current version of the library
-__version__ = '0.13.0'
-
-# default chunk size (in bytes) for reading remote data
-try:
-    import resource
-    CHUNK_SIZE = resource.getpagesize()
-except Exception:
-    CHUNK_SIZE = 4096
-
-
-config = Config()
-
-
-def get_version():
-    """
-    Returns a string with the current version of the library (e.g., "0.2.0")
-    """
-    return __version__
-
-
-def init_logging():
-    """
-    Initialize BioBlend's logging from a configuration file.
-    """
-    for config_file in BioBlendConfigLocations:
-        try:
-            logging.config.fileConfig(os.path.expanduser(config_file))
-        except Exception:
-            pass
-
-
-class NullHandler(logging.Handler):
-    def emit(self, record):
-        pass
-
-
-# By default, do not force any logging by the library. If you want to see the
-# log messages in your scripts, add the following to the top of your script:
-#   import logging
-#   logging.basicConfig(filename="bioblend.log", level=logging.DEBUG)
-default_format_string = "%(asctime)s %(name)s [%(levelname)s]: %(message)s"
-log = logging.getLogger('bioblend')
-log.addHandler(NullHandler())
-init_logging()
-
-# Convenience functions to set logging to a particular file or stream
-# To enable either of these, simply add the following at the top of a
-# bioblend module:
-#   import bioblend
-#   bioblend.set_stream_logger(__name__)
-
-
-def set_file_logger(name, filepath, level=logging.INFO, format_string=None):
-    global log
-    if not format_string:
-        format_string = default_format_string
-    logger = logging.getLogger(name)
-    logger.setLevel(level)
-    fh = logging.FileHandler(filepath)
-    fh.setLevel(level)
-    formatter = logging.Formatter(format_string)
-    fh.setFormatter(formatter)
-    logger.addHandler(fh)
-    log = logger
-
-
-def set_stream_logger(name, level=logging.DEBUG, format_string=None):
-    global log
-    if not format_string:
-        format_string = default_format_string
-    logger = logging.getLogger(name)
-    logger.setLevel(level)
-    fh = logging.StreamHandler()
-    fh.setLevel(level)
-    formatter = logging.Formatter(format_string)
-    fh.setFormatter(formatter)
-    logger.addHandler(fh)
-    log = logger
-
-
-class ConnectionError(Exception):
-    """
-    An exception class that is raised when unexpected HTTP responses come back.
-
-    Should make it easier to debug when strange HTTP things happen such as a
-    proxy server getting in the way of the request etc.
-    @see: body attribute to see the content of the http response
-    """
-    def __init__(self, message, body=None, status_code=None):
-        super(ConnectionError, self).__init__(message)
-        self.body = body
-        self.status_code = status_code
-
-    def __str__(self):
-        return "{0}: {1}".format(self.args[0], self.body)