Mercurial > repos > shellac > guppy_basecaller
diff env/lib/python3.7/site-packages/bioblend/_tests/CloudmanTestBase.py @ 5:9b1c78e6ba9c draft default tip
"planemo upload commit 6c0a8142489327ece472c84e558c47da711a9142"
| author | shellac |
|---|---|
| date | Mon, 01 Jun 2020 08:59:25 -0400 |
| parents | 79f47841a781 |
| children |
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--- a/env/lib/python3.7/site-packages/bioblend/_tests/CloudmanTestBase.py Thu May 14 16:47:39 2020 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,68 +0,0 @@ -""" -Tests the functionality of the Blend CloudMan API. These tests require working -credentials to supported cloud infrastructure. -""" -import os - -from bioblend.util import Bunch -from . import test_util -from .test_util import unittest - - -class CloudmanTestBase(unittest.TestCase): - - @classmethod - @test_util.skip_unless_cloudman() - def setUpClass(cls): - if os.environ.get('BIOBLEND_CLOUD_TYPE') == 'EC2': - cls.access_key = os.environ['BIOBLEND_ACCESS_KEY'] - cls.secret_key = os.environ['BIOBLEND_SECRET_KEY'] - cls.cluster_name = 'Blend CloudMan' - cls.ami_id = os.environ['BIOBLEND_AMI_ID'] - cls.instance_type = 'm1.small' - cls.password = 'password' - cls.cloud_metadata = Bunch( - id='1', # for compatibility w/ DB representation - name="Amazon", - cloud_type="ec2", - bucket_default="cloudman", - region_name="us-east-1", - region_endpoint="ec2.amazonaws.com", - ec2_port="", - ec2_conn_path="/", - cidr_range="", - is_secure=True, - s3_host="s3.amazonaws.com", - s3_port="", - s3_conn_path='/') - else: - # Assume OpenStack/NeCTAR - cls.access_key = os.environ['BIOBLEND_ACCESS_KEY'] - cls.secret_key = os.environ['BIOBLEND_SECRET_KEY'] - cls.cloud_metadata = Bunch( - id='-1', - name="NeCTAR", - cloud_type='openstack', - bucket_default='cloudman-os', - region_name='melbourne', - region_endpoint='nova.rc.nectar.org.au', - ec2_port=8773, - ec2_conn_path='/services/Cloud', - cidr_range='115.146.92.0/22', - is_secure=True, - s3_host='swift.rc.nectar.org.au', - s3_port=8888, - s3_conn_path='/') - cls.cluster_name = 'Blend CloudMan' - cls.ami_id = os.environ['BIOBLEND_AMI_ID'] - cls.instance_type = 'm1.small' - cls.password = 'password' - - @classmethod - @test_util.skip_unless_cloudman() - def tearDownClass(cls): - try: - # TODO: cloudman's terminate method has a bug. Needs fix - cls.cmi.terminate(delete_cluster=True) - except Exception: - pass
