diff env/lib/python3.7/site-packages/boto/services/bs.py @ 5:9b1c78e6ba9c draft default tip

"planemo upload commit 6c0a8142489327ece472c84e558c47da711a9142"

--- a/env/lib/python3.7/site-packages/boto/services/bs.py	Thu May 14 16:47:39 2020 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,180 +0,0 @@
-#!/usr/bin/env python
-# Copyright (c) 2006-2008 Mitch Garnaat http://garnaat.org/
-#
-# Permission is hereby granted, free of charge, to any person obtaining a
-# copy of this software and associated documentation files (the
-# "Software"), to deal in the Software without restriction, including
-# without limitation the rights to use, copy, modify, merge, publish, dis-
-# tribute, sublicense, and/or sell copies of the Software, and to permit
-# persons to whom the Software is furnished to do so, subject to the fol-
-# lowing conditions:
-#
-# The above copyright notice and this permission notice shall be included
-# in all copies or substantial portions of the Software.
-#
-# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS
-# OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABIL-
-# ITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT
-# SHALL THE AUTHOR BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, 
-# WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
-# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS
-# IN THE SOFTWARE.
-from optparse import OptionParser
-from boto.services.servicedef import ServiceDef
-from boto.services.submit import Submitter
-from boto.services.result import ResultProcessor
-import boto
-import sys, os
-from boto.compat import StringIO
-
-class BS(object):
-
-    Usage = "usage: %prog [options] config_file command"
-
-    Commands = {'reset' : 'Clear input queue and output bucket',
-                'submit' : 'Submit local files to the service',
-                'start' : 'Start the service',
-                'status' : 'Report on the status of the service buckets and queues',
-                'retrieve' : 'Retrieve output generated by a batch',
-                'batches' : 'List all batches stored in current output_domain'}
-    
-    def __init__(self):
-        self.service_name = None
-        self.parser = OptionParser(usage=self.Usage)
-        self.parser.add_option("--help-commands", action="store_true", dest="help_commands",
-                               help="provides help on the available commands")
-        self.parser.add_option("-a", "--access-key", action="store", type="string",
-                               help="your AWS Access Key")
-        self.parser.add_option("-s", "--secret-key", action="store", type="string",
-                               help="your AWS Secret Access Key")
-        self.parser.add_option("-p", "--path", action="store", type="string", dest="path",
-                               help="the path to local directory for submit and retrieve")
-        self.parser.add_option("-k", "--keypair", action="store", type="string", dest="keypair",
-                               help="the SSH keypair used with launched instance(s)")
-        self.parser.add_option("-l", "--leave", action="store_true", dest="leave",
-                               help="leave the files (don't retrieve) files during retrieve command")
-        self.parser.set_defaults(leave=False)
-        self.parser.add_option("-n", "--num-instances", action="store", type="string", dest="num_instances",
-                               help="the number of launched instance(s)")
-        self.parser.set_defaults(num_instances=1)
-        self.parser.add_option("-i", "--ignore-dirs", action="append", type="string", dest="ignore",
-                               help="directories that should be ignored by submit command")
-        self.parser.add_option("-b", "--batch-id", action="store", type="string", dest="batch",
-                               help="batch identifier required by the retrieve command")
-
-    def print_command_help(self):
-        print('\nCommands:')
-        for key in self.Commands.keys():
-            print('  %s\t\t%s' % (key, self.Commands[key]))
-
-    def do_reset(self):
-        iq = self.sd.get_obj('input_queue')
-        if iq:
-            print('clearing out input queue')
-            i = 0
-            m = iq.read()
-            while m:
-                i += 1
-                iq.delete_message(m)
-                m = iq.read()
-            print('deleted %d messages' % i)
-        ob = self.sd.get_obj('output_bucket')
-        ib = self.sd.get_obj('input_bucket')
-        if ob:
-            if ib and ob.name == ib.name:
-                return
-            print('delete generated files in output bucket')
-            i = 0
-            for k in ob:
-                i += 1
-                k.delete()
-            print('deleted %d keys' % i)
-
-    def do_submit(self):
-        if not self.options.path:
-            self.parser.error('No path provided')
-        if not os.path.exists(self.options.path):
-            self.parser.error('Invalid path (%s)' % self.options.path)
-        s = Submitter(self.sd)
-        t = s.submit_path(self.options.path, None, self.options.ignore, None,
-                          None, True, self.options.path)
-        print('A total of %d files were submitted' % t[1])
-        print('Batch Identifier: %s' % t[0])
-
-    def do_start(self):
-        ami_id = self.sd.get('ami_id')
-        instance_type = self.sd.get('instance_type', 'm1.small')
-        security_group = self.sd.get('security_group', 'default')
-        if not ami_id:
-            self.parser.error('ami_id option is required when starting the service')
-        ec2 = boto.connect_ec2()
-        if not self.sd.has_section('Credentials'):
-            self.sd.add_section('Credentials')
-            self.sd.set('Credentials', 'aws_access_key_id', ec2.aws_access_key_id)
-            self.sd.set('Credentials', 'aws_secret_access_key', ec2.aws_secret_access_key)
-        s = StringIO()
-        self.sd.write(s)
-        rs = ec2.get_all_images([ami_id])
-        img = rs[0]
-        r = img.run(user_data=s.getvalue(), key_name=self.options.keypair,
-                    max_count=self.options.num_instances,
-                    instance_type=instance_type,
-                    security_groups=[security_group])
-        print('Starting AMI: %s' % ami_id)
-        print('Reservation %s contains the following instances:' % r.id)
-        for i in r.instances:
-            print('\t%s' % i.id)
-
-    def do_status(self):
-        iq = self.sd.get_obj('input_queue')
-        if iq:
-            print('The input_queue (%s) contains approximately %s messages' % (iq.id, iq.count()))
-        ob = self.sd.get_obj('output_bucket')
-        ib = self.sd.get_obj('input_bucket')
-        if ob:
-            if ib and ob.name == ib.name:
-                return
-            total = 0
-            for k in ob:
-                total += 1
-            print('The output_bucket (%s) contains %d keys' % (ob.name, total))
-
-    def do_retrieve(self):
-        if not self.options.path:
-            self.parser.error('No path provided')
-        if not os.path.exists(self.options.path):
-            self.parser.error('Invalid path (%s)' % self.options.path)
-        if not self.options.batch:
-            self.parser.error('batch identifier is required for retrieve command')
-        s = ResultProcessor(self.options.batch, self.sd)
-        s.get_results(self.options.path, get_file=(not self.options.leave))
-
-    def do_batches(self):
-        d = self.sd.get_obj('output_domain')
-        if d:
-            print('Available Batches:')
-            rs = d.query("['type'='Batch']")
-            for item in rs:
-                print('  %s' % item.name)
-        else:
-            self.parser.error('No output_domain specified for service')
-            
-    def main(self):
-        self.options, self.args = self.parser.parse_args()
-        if self.options.help_commands:
-            self.print_command_help()
-            sys.exit(0)
-        if len(self.args) != 2:
-            self.parser.error("config_file and command are required")
-        self.config_file = self.args[0]
-        self.sd = ServiceDef(self.config_file)
-        self.command = self.args[1]
-        if hasattr(self, 'do_%s' % self.command):
-            method = getattr(self, 'do_%s' % self.command)
-            method()
-        else:
-            self.parser.error('command (%s) not recognized' % self.command)
-
-if __name__ == "__main__":
-    bs = BS()
-    bs.main()