diff env/lib/python3.7/site-packages/cwltool/tests/test_secrets.py @ 5:9b1c78e6ba9c draft default tip

"planemo upload commit 6c0a8142489327ece472c84e558c47da711a9142"

--- a/env/lib/python3.7/site-packages/cwltool/tests/test_secrets.py	Thu May 14 16:47:39 2020 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,77 +0,0 @@
-import shutil
-import sys
-import tempfile
-import pytest
-from cwltool.secrets import SecretStore
-from cwltool.main import main
-from .util import (get_data, needs_docker, needs_singularity,
-                   windows_needs_docker)
-from io import StringIO
-
-
[e-mail]
-def secrets():
-    sec_store = SecretStore()
-    job = {'foo': 'bar',
-           'baz': 'quux'}
-
-    sec_store.store(['foo'], job)
-    return sec_store, job
-
-def test_obscuring(secrets):
-    storage, obscured = secrets
-    assert obscured['foo'] != 'bar'
-    assert obscured['baz'] == 'quux'
-    assert storage.retrieve(obscured)['foo'] == 'bar'
-
-obscured_factories_expected = [
-    ((lambda x: 'hello %s' % x), 'hello bar'),
-    ((lambda x: ['echo', 'hello %s' % x]), ['echo', 'hello bar']),
-    ((lambda x: {'foo': x}), {'foo': 'bar'}),
-]
-
[e-mail]('factory,expected', obscured_factories_expected)
-def test_secrets(factory, expected, secrets):
-    storage, obscured = secrets
-    pattern = factory(obscured['foo'])
-    assert pattern != expected
-
-    assert storage.has_secret(pattern)
-    assert storage.retrieve(pattern) == expected
-
-    assert obscured['foo'] != 'bar'
-    assert obscured['baz'] == 'quux'
-
-@needs_docker
-def test_secret_workflow_log():
-    stream = StringIO()
-    tmpdir = tempfile.mkdtemp()
-    main(["--debug", "--enable-ext", "--outdir", tmpdir,
-          get_data("tests/wf/secret_wf.cwl"), "--pw", "Hoopla!"],
-         stderr=stream)
-
-    shutil.rmtree(tmpdir)
-    assert "Hoopla!" not in stream.getvalue()
-
-@needs_singularity
-def test_secret_workflow_log_singularity():
-    stream = StringIO()
-    tmpdir = tempfile.mkdtemp()
-    main(["--debug", "--outdir", tmpdir, "--singularity",
-          get_data("tests/wf/secret_wf.cwl"), "--pw", "Hoopla!"],
-         stderr=stream)
-
-    shutil.rmtree(tmpdir)
-    assert "Hoopla!" not in stream.getvalue()
-
-@needs_docker
-def test_secret_workflow_log_override():
-    stream = StringIO()
-    tmpdir = tempfile.mkdtemp()
-    main(["--debug", "--outdir", tmpdir, "--enable-ext", "--overrides",
-          get_data("tests/wf/override-no-secrets.yml"),
-          get_data("tests/wf/secret_wf.cwl"), "--pw", "Hoopla!"],
-         stderr=stream)
-    shutil.rmtree(tmpdir)
-
-    assert "Hoopla!" in stream.getvalue()