diff env/lib/python3.7/site-packages/ephemeris/common_parser.py @ 5:9b1c78e6ba9c draft default tip

"planemo upload commit 6c0a8142489327ece472c84e558c47da711a9142"

--- a/env/lib/python3.7/site-packages/ephemeris/common_parser.py	Thu May 14 16:47:39 2020 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,32 +0,0 @@
-#!/usr/bin/env python
-
-import argparse
-
-
-def get_common_args(login_required=True, log_file=False):
-
-    parser = argparse.ArgumentParser(add_help=False)
-    general_group = parser.add_argument_group('General options')
-    general_group.add_argument("-v", "--verbose", help="Increase output verbosity.", action="store_true")
-    if log_file:
-        general_group.add_argument("--log_file",
-                                   dest="log_file",
-                                   help="Where the log file should be stored. "
-                                   "Default is a file in your system's temp folder",
-                                   default=None)
-
-    con_group = parser.add_argument_group('Galaxy connection')
-    con_group.add_argument("-g", "--galaxy",
-                           help="Target Galaxy instance URL/IP address",
-                           default="http://localhost:8080")
-
-    if login_required:
-        con_group.add_argument("-u", "--user",
-                               help="Galaxy user email address")
-        con_group.add_argument("-p", "--password",
-                               help="Password for the Galaxy user")
-        con_group.add_argument("-a", "--api_key",
-                               dest="api_key",
-                               help="Galaxy admin user API key (required if not defined in the tools list file)")
-
-    return parser