Mercurial > repos > shellac > guppy_basecaller
diff env/lib/python3.7/site-packages/planemo/engine/toil.py @ 5:9b1c78e6ba9c draft default tip
"planemo upload commit 6c0a8142489327ece472c84e558c47da711a9142"
| author | shellac |
|---|---|
| date | Mon, 01 Jun 2020 08:59:25 -0400 |
| parents | 79f47841a781 |
| children |
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--- a/env/lib/python3.7/site-packages/planemo/engine/toil.py Thu May 14 16:47:39 2020 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,24 +0,0 @@ -"""Module contianing the :class:`ToilEngine` implementation of :class:`Engine`.""" - -from planemo import cwl -from planemo.runnable import RunnableType -from .interface import BaseEngine - - -class ToilEngine(BaseEngine): - """An :class:`Engine` implementation backed by Toil. - - More information on toil can be found at https://github.com/BD2KGenomics/toil. - """ - - handled_runnable_types = [RunnableType.cwl_tool, RunnableType.cwl_workflow] - - def _run(self, runnable, job_path): - """Run CWL job using Toil.""" - path = runnable.path - return cwl.run_toil(self._ctx, path, job_path, **self._kwds) - - -__all__ = ( - "ToilEngine", -)
