diff env/lib/python3.7/site-packages/planemo/linters/xsd.py @ 5:9b1c78e6ba9c draft default tip

"planemo upload commit 6c0a8142489327ece472c84e558c47da711a9142"
author shellac
date Mon, 01 Jun 2020 08:59:25 -0400
parents 79f47841a781
children
line wrap: on
line diff
--- a/env/lib/python3.7/site-packages/planemo/linters/xsd.py	Thu May 14 16:47:39 2020 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,28 +0,0 @@
-"""Tool linting module that lints Galaxy tool against experimental XSD."""
-import copy
-import os
-import tempfile
-
-import galaxy.tool_util
-
-import planemo.lint
-
-TOOL_XSD = os.path.join(os.path.dirname(galaxy.tool_util.__file__), 'xsd', "galaxy.xsd")
-
-
-def lint_tool_xsd(tool_xml, lint_ctx):
-    """Write a temp file out and lint it."""
-    with tempfile.NamedTemporaryFile() as tf:
-        _clean_root(tool_xml).write(tf.name)
-        planemo.lint.lint_xsd(lint_ctx, TOOL_XSD, tf.name)
-
-
-def _clean_root(tool_xml):
-    """XSD assumes macros have been expanded, so remove them."""
-    clean_tool_xml = copy.deepcopy(tool_xml)
-    to_remove = []
-    for macros_el in clean_tool_xml.getroot().findall("macros"):
-        to_remove.append(macros_el)
-    for macros_el in to_remove:
-        clean_tool_xml.getroot().remove(macros_el)
-    return clean_tool_xml