Mercurial > repos > shellac > sam_consensus_v3
annotate env/lib/python3.9/site-packages/cwltool/tests/checker_wf/broken-wf.cwl @ 0:4f3585e2f14b draft default tip
"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
author | shellac |
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date | Mon, 22 Mar 2021 18:12:50 +0000 |
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1 #!/usr/bin/env cwl-runner |
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2 class: Workflow |
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3 cwlVersion: v1.0 |
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4 requirements: |
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5 ScatterFeatureRequirement: {} |
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6 MultipleInputFeatureRequirement: {} |
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7 StepInputExpressionRequirement: {} |
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8 inputs: |
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9 letters0: |
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10 type: [string, int] |
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11 default: "a0" |
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12 letters1: |
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13 type: string[] |
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14 default: ["a1", "b1"] |
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15 letters2: |
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16 type: [string, int] |
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17 default: "a2" |
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18 letters3: |
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19 type: string[] |
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20 default: ["a3", "b3"] |
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21 letters4: |
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22 type: int |
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23 default: 4 |
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24 letters5: |
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25 type: string[] |
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26 default: ["a5", "b5", "c5"] |
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27 |
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28 outputs: |
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29 all: |
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30 type: File[] |
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31 outputSource: cat/txt |
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32 |
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33 steps: |
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34 echo_v: |
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35 run: echo.cwl |
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36 in: |
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37 echo_in: {} |
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38 out: [txt] |
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39 echo_w: |
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40 run: echo.cwl |
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41 in: |
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42 echo_in: letters0 |
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43 out: [txt] |
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44 echo_x: |
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45 run: echo.cwl |
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46 scatter: echo_in |
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47 in: |
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48 echo_in: |
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49 source: [letters1, letters2] |
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50 linkMerge: merge_nested |
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51 out: [txt] |
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52 echo_y: |
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53 run: echo.cwl |
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54 scatter: echo_in |
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55 in: |
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56 echo_in: |
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57 source: [letters3, letters4] |
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58 linkMerge: merge_flattened |
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59 out: [txt] |
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60 echo_z: |
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61 run: echo.cwl |
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62 in: |
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63 echo_in: |
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64 source: letters5 |
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65 valueFrom: "special value parsed in valueFrom" |
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66 out: [txt] |
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67 cat: |
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68 run: cat.cwl |
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69 in: |
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70 cat_in: |
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71 source: [echo_w/txt, echo_x/txt, echo_y/txt, echo_z/txt, letters0] |
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72 linkMerge: merge_flattened |
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73 out: [txt] |