Mercurial > repos > shellac > sam_consensus_v3
annotate env/lib/python3.9/site-packages/cwltool/tests/wf/mpi_simple_wf.cwl @ 0:4f3585e2f14b draft default tip
"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
author | shellac |
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date | Mon, 22 Mar 2021 18:12:50 +0000 |
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"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
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1 #!/usr/bin/env cwl-runner |
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2 |
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3 cwlVersion: v1.1 |
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4 class: Workflow |
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5 doc: | |
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6 Simple 2 step workflow to check that workflow steps are |
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7 independently picking up on the number of processes. First run the |
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8 parallel get PIDs step (on the input num procs) then run (on a |
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9 single proc) the line count. This should equal the input. |
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10 |
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11 inputs: |
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12 processes: |
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13 type: int |
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14 |
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15 steps: |
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16 par_pids: |
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17 run: mpi_expr.cwl |
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18 in: |
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19 processes: processes |
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20 out: |
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21 - pids |
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22 |
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23 count: |
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24 run: mpi_line_count.cwl |
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25 in: |
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26 pid_file: par_pids/pids |
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27 out: |
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28 - line_count |
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29 |
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30 outputs: |
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31 line_count: |
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32 type: File |
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33 outputSource: count/line_count |
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34 |