annotate env/lib/python3.9/site-packages/galaxy/tool_util/deps/brew_util.py @ 0:4f3585e2f14b draft default tip

"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
author shellac
date Mon, 22 Mar 2021 18:12:50 +0000
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1 """ brew_exts defines generic extensions to Homebrew this file
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2 builds on those abstraction and provides Galaxy specific functionality
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3 not useful to the brew external commands.
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4 """
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5 from ..deps import brew_exts
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6
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7 DEFAULT_TAP = "homebrew/science"
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8
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9
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10 class HomebrewRecipe:
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11
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12 def __init__(self, recipe, version, tap):
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13 self.recipe = recipe
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14 self.version = version
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15 self.tap = tap
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16
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17
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18 def requirements_to_recipes(requirements):
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19 return filter(None, map(requirement_to_recipe, requirements))
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20
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21
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22 def requirement_to_recipe(requirement):
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23 if requirement.type != "package":
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24 return None
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25 # TOOD: Allow requirements to annotate optionalbrew specific
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26 # adaptions.
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27 recipe_name = requirement.name
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28 recipe_version = requirement.version
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29 return HomebrewRecipe(recipe_name, recipe_version, tap=DEFAULT_TAP)
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30
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31
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32 def requirements_to_recipe_contexts(requirements, brew_context):
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33 def to_recipe_context(homebrew_recipe):
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34 return brew_exts.RecipeContext(
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35 homebrew_recipe.recipe,
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36 homebrew_recipe.version,
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37 brew_context
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38 )
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39 return map(to_recipe_context, requirements_to_recipes(requirements))