Mercurial > repos > shellac > sam_consensus_v3
annotate env/lib/python3.9/site-packages/cwltool/schemas/v1.2.0-dev2/Workflow.yml @ 0:4f3585e2f14b draft default tip
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author | shellac |
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date | Mon, 22 Mar 2021 18:12:50 +0000 |
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1 saladVersion: v1.1 |
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2 $base: "https://w3id.org/cwl/cwl#" |
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3 |
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4 $namespaces: |
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5 cwl: "https://w3id.org/cwl/cwl#" |
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6 rdfs: "http://www.w3.org/2000/01/rdf-schema#" |
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7 |
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8 $graph: |
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9 |
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10 - name: "WorkflowDoc" |
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11 type: documentation |
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12 doc: |
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13 - | |
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14 # Common Workflow Language (CWL) Workflow Description, v1.2.0-dev2 |
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15 |
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16 This version: |
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17 * https://w3id.org/cwl/v1.2.0-dev2/ |
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18 |
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19 Current version: |
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20 * https://w3id.org/cwl/ |
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21 - "\n\n" |
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22 - {$include: contrib.md} |
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23 - "\n\n" |
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24 - | |
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25 # Abstract |
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26 |
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27 This specification defines the Common Workflow Language (CWL) |
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28 Workflow description, a vendor-neutral standard for representing |
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29 analysis tasks where a sequence of operations are described |
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30 using a directed graph of operations to transform input to |
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31 output. CWL is portable across a variety of computing |
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32 platforms. |
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33 |
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34 - {$include: intro.md} |
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35 |
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36 - | |
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37 |
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38 ## Introduction to CWL Workflow standard v1.2.0-dev2 |
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39 |
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40 This specification represents the latest stable release from the |
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41 CWL group. Since the v1.1 release, v1.2.0-dev2 introduces the |
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42 following updates to the CWL Workflow standard. |
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43 Documents should to use `cwlVersion: v1.2.0-dev2` to make use of new |
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44 syntax and features introduced in v1.2.0-dev2. Existing v1.1 documents |
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45 should be trivially updatable by changing `cwlVersion`, however |
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46 CWL documents that relied on previously undefined or |
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47 underspecified behavior may have slightly different behavior in |
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48 v1.2.0-dev2. |
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49 |
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50 ## Changelog |
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51 |
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52 * Adds `when` field to [WorkflowStep](#WorkflowStep) for conditional |
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53 execution |
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54 * Adds `pickValue` field to [WorkflowStepInput](#WorkflowStepInput) and |
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55 [WorkflowOutputParameter](#WorkflowOutputParameter) for selecting among null and |
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56 non-null source values |
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57 * Add abstract [Operation](#Operation) that can be used as a |
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58 no-op stand-in to describe abstract workflows. |
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59 * (Workflow)[#Workflow], (ExpressionTool)[#ExpressionTool] and |
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60 (Operation)[#Operation] can now express `intent` with an |
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61 identifier for the type of computational operation. |
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62 |
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63 See also the [CWL Command Line Tool Description, v1.2.0-dev2 changelog](CommandLineTool.html#Changelog). |
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64 |
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65 ## Purpose |
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66 |
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67 The Common Workflow Language Command Line Tool Description express |
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68 workflows for data-intensive science, such as Bioinformatics, Chemistry, |
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69 Physics, and Astronomy. This specification is intended to define a data |
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70 and execution model for Workflows that can be implemented on top of a |
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71 variety of computing platforms, ranging from an individual workstation to |
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72 cluster, grid, cloud, and high performance computing systems. Details related |
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73 to execution of these workflow not laid out in this specification are open to |
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74 interpretation by the computing platform implementing this specification. |
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75 |
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76 - {$include: concepts.md} |
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77 |
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78 - name: ExpressionToolOutputParameter |
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79 type: record |
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80 extends: OutputParameter |
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81 fields: |
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82 - name: type |
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83 type: |
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84 - CWLType |
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85 - OutputRecordSchema |
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86 - OutputEnumSchema |
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87 - OutputArraySchema |
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88 - string |
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89 - type: array |
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90 items: |
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91 - CWLType |
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92 - OutputRecordSchema |
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93 - OutputEnumSchema |
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94 - OutputArraySchema |
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95 - string |
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96 jsonldPredicate: |
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97 "_id": "sld:type" |
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98 "_type": "@vocab" |
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99 refScope: 2 |
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100 typeDSL: True |
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101 doc: | |
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102 Specify valid types of data that may be assigned to this parameter. |
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103 |
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104 |
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105 - name: WorkflowInputParameter |
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106 type: record |
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107 extends: InputParameter |
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108 docParent: "#Workflow" |
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109 fields: |
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110 - name: type |
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111 type: |
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112 - CWLType |
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113 - InputRecordSchema |
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114 - InputEnumSchema |
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115 - InputArraySchema |
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116 - string |
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117 - type: array |
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118 items: |
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119 - CWLType |
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120 - InputRecordSchema |
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121 - InputEnumSchema |
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122 - InputArraySchema |
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123 - string |
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124 jsonldPredicate: |
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125 "_id": "sld:type" |
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126 "_type": "@vocab" |
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127 refScope: 2 |
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128 typeDSL: True |
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129 doc: | |
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130 Specify valid types of data that may be assigned to this parameter. |
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131 - name: inputBinding |
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132 type: InputBinding? |
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133 doc: | |
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134 Deprecated. Preserved for v1.0 backwards compatability. Will be removed in |
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135 CWL v2.0. Use `WorkflowInputParameter.loadContents` instead. |
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136 jsonldPredicate: "cwl:inputBinding" |
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137 |
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138 |
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139 - type: record |
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140 name: ExpressionTool |
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141 extends: Process |
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142 specialize: |
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143 - specializeFrom: InputParameter |
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144 specializeTo: WorkflowInputParameter |
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145 - specializeFrom: OutputParameter |
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146 specializeTo: ExpressionToolOutputParameter |
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147 documentRoot: true |
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148 doc: | |
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149 An ExpressionTool is a type of Process object that can be run by itself |
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150 or as a Workflow step. It executes a pure Javascript expression that has |
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151 access to the same input parameters as a workflow. It is meant to be used |
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152 sparingly as a way to isolate complex Javascript expressions that need to |
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153 operate on input data and produce some result; perhaps just a |
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154 rearrangement of the inputs. No Docker software container is required |
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155 or allowed. |
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156 fields: |
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157 - name: class |
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158 jsonldPredicate: |
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159 "_id": "@type" |
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160 "_type": "@vocab" |
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161 type: string |
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162 - name: expression |
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163 type: Expression |
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164 doc: | |
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165 The expression to execute. The expression must return a JSON object which |
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166 matches the output parameters of the ExpressionTool. |
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167 |
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168 - name: LinkMergeMethod |
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169 type: enum |
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170 docParent: "#WorkflowStepInput" |
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171 doc: The input link merge method, described in [WorkflowStepInput](#WorkflowStepInput). |
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172 symbols: |
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173 - merge_nested |
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174 - merge_flattened |
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175 |
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176 |
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177 - name: PickValueMethod |
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178 type: enum |
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179 docParent: "#WorkflowStepInput" |
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180 doc: | |
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181 Picking non-null values among inbound data links, described in [WorkflowStepInput](#WorkflowStepInput). |
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182 symbols: |
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183 - first_non_null |
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184 - only_non_null |
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185 - all_non_null |
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186 |
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187 |
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188 - name: WorkflowOutputParameter |
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189 type: record |
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190 extends: OutputParameter |
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191 docParent: "#Workflow" |
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192 doc: | |
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193 Describe an output parameter of a workflow. The parameter must be |
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194 connected to one or more parameters defined in the workflow that |
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195 will provide the value of the output parameter. It is legal to |
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196 connect a WorkflowInputParameter to a WorkflowOutputParameter. |
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197 |
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198 See [WorkflowStepInput](#WorkflowStepInput) for discussion of |
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199 `linkMerge` and `pickValue`. |
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200 fields: |
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201 - name: outputSource |
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202 doc: | |
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203 Specifies one or more workflow parameters that supply the value of to |
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204 the output parameter. |
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205 jsonldPredicate: |
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206 "_id": "cwl:outputSource" |
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207 "_type": "@id" |
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208 refScope: 0 |
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209 type: |
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210 - string? |
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211 - string[]? |
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212 - name: linkMerge |
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213 type: ["null", LinkMergeMethod] |
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214 jsonldPredicate: "cwl:linkMerge" |
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215 default: merge_nested |
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216 doc: | |
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217 The method to use to merge multiple sources into a single array. |
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218 If not specified, the default method is "merge_nested". |
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219 |
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220 - name: pickValue |
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221 type: ["null", PickValueMethod] |
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222 jsonldPredicate: "cwl:pickValue" |
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223 doc: | |
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224 The method to use to choose non-null elements among multiple sources. |
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225 |
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226 - name: type |
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227 type: |
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228 - CWLType |
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229 - OutputRecordSchema |
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230 - OutputEnumSchema |
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231 - OutputArraySchema |
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232 - string |
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233 - type: array |
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234 items: |
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235 - CWLType |
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236 - OutputRecordSchema |
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237 - OutputEnumSchema |
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238 - OutputArraySchema |
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239 - string |
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240 jsonldPredicate: |
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241 "_id": "sld:type" |
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242 "_type": "@vocab" |
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243 refScope: 2 |
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244 typeDSL: True |
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245 doc: | |
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246 Specify valid types of data that may be assigned to this parameter. |
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247 |
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248 |
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249 - name: Sink |
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250 type: record |
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251 abstract: true |
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252 fields: |
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253 - name: source |
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254 doc: | |
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255 Specifies one or more workflow parameters that will provide input to |
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256 the underlying step parameter. |
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257 jsonldPredicate: |
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258 "_id": "cwl:source" |
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259 "_type": "@id" |
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260 refScope: 2 |
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261 type: |
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262 - string? |
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263 - string[]? |
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264 - name: linkMerge |
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265 type: LinkMergeMethod? |
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266 jsonldPredicate: "cwl:linkMerge" |
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267 default: merge_nested |
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268 doc: | |
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269 The method to use to merge multiple inbound links into a single array. |
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270 If not specified, the default method is "merge_nested". |
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271 - name: pickValue |
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272 type: ["null", PickValueMethod] |
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273 jsonldPredicate: "cwl:pickValue" |
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274 doc: | |
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275 The method to use to choose non-null elements among multiple sources. |
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276 |
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277 |
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278 - type: record |
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279 name: WorkflowStepInput |
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280 extends: [Identified, Sink, LoadContents, Labeled] |
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281 docParent: "#WorkflowStep" |
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282 doc: | |
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283 The input of a workflow step connects an upstream parameter (from the |
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284 workflow inputs, or the outputs of other workflows steps) with the input |
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285 parameters of the process specified by the `run` field. Only input parameters |
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286 declared by the target process will be passed through at runtime to the process |
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287 though additonal parameters may be specified (for use within `valueFrom` |
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288 expressions for instance) - unconnected or unused parameters do not represent an |
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289 error condition. |
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290 |
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291 # Input object |
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292 |
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293 A WorkflowStepInput object must contain an `id` field in the form |
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294 `#fieldname` or `#prefix/fieldname`. When the `id` field contains a slash |
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295 `/` the field name consists of the characters following the final slash |
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296 (the prefix portion may contain one or more slashes to indicate scope). |
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297 This defines a field of the workflow step input object with the value of |
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298 the `source` parameter(s). |
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299 |
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300 # Merging multiple inbound data links |
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301 |
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302 To merge multiple inbound data links, |
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303 [MultipleInputFeatureRequirement](#MultipleInputFeatureRequirement) must be specified |
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304 in the workflow or workflow step requirements. |
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305 |
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306 If the sink parameter is an array, or named in a [workflow |
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307 scatter](#WorkflowStep) operation, there may be multiple inbound data links |
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308 listed in the `source` field. The values from the input links are merged |
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309 depending on the method specified in the `linkMerge` field. If not |
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310 specified, the default method is "merge_nested". |
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311 |
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312 * **merge_nested** |
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313 |
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314 The input must be an array consisting of exactly one entry for each |
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315 input link. If "merge_nested" is specified with a single link, the value |
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316 from the link must be wrapped in a single-item list. |
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317 |
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318 * **merge_flattened** |
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319 |
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320 1. The source and sink parameters must be compatible types, or the source |
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321 type must be compatible with single element from the "items" type of |
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322 the destination array parameter. |
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323 2. Source parameters which are arrays are concatenated. |
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324 Source parameters which are single element types are appended as |
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325 single elements. |
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326 |
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327 # Picking non-null values among inbound data links |
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328 |
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329 If present, `pickValue` specifies how to picking non-null values among inbound data links. |
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330 |
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331 `pickValue` is evaluated |
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332 1. Once all source values from upstream step or parameters are available. |
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333 2. After `linkMerge`. |
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334 3. Before `scatter` or `valueFrom`. |
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335 |
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336 This is specifically intended to be useful in combination with |
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337 [conditional execution](#WorkflowStep), where several upstream |
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338 steps may be connected to a single input (`source` is a list), and |
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339 skipped steps produce null values. |
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340 |
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341 Static type checkers should check for type consistency after infering what the type |
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342 will be after `pickValue` is applied, just as they do currently for `linkMerge`. |
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343 |
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344 * **first_non_null** |
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345 |
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346 For the first level of a list input, pick the first non-null element. The result is a scalar. |
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347 It is an error if there is no non-null element. Examples: |
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348 * `[null, x, null, y] -> x` |
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349 * `[null, [null], null, y] -> [null]` |
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350 * `[null, null, null] -> Runtime Error` |
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351 |
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352 *Intended use case*: If-else pattern where the |
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353 value comes either from a conditional step or from a default or |
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354 fallback value. The conditional step(s) should be placed first in |
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355 the list. |
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356 |
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357 * **only_non_null** |
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358 |
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359 For the first level of a list input, pick the single non-null element. The result is a scalar. |
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360 It is an error if there is more than one non-null element. Examples: |
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361 |
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362 * `[null, x, null] -> x` |
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363 * `[null, x, null, y] -> Runtime Error` |
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364 * `[null, [null], null] -> [null]` |
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365 * `[null, null, null] -> Runtime Error` |
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366 |
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367 *Intended use case*: Switch type patterns where developer considers |
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368 more than one active code path as a workflow error |
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369 (possibly indicating an error in writing `when` condition expressions). |
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370 |
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371 * **all_non_null** |
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372 |
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373 For the first level of a list input, pick all non-null values. |
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374 The result is a list, which may be empty. Examples: |
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375 |
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376 * `[null, x, null] -> [x]` |
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377 * `[x, null, y] -> [x, y]` |
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378 * `[null, [x], [null]] -> [[x], [null]]` |
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379 * `[null, null, null] -> []` |
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380 |
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381 *Intended use case*: It is valid to have more than one source, but |
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382 sources are conditional, so null sources (from skipped steps) |
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383 should be filtered out. |
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384 |
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385 fields: |
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386 - name: default |
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387 type: ["null", Any] |
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388 doc: | |
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389 The default value for this parameter to use if either there is no |
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390 `source` field, or the value produced by the `source` is `null`. The |
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391 default must be applied prior to scattering or evaluating `valueFrom`. |
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392 jsonldPredicate: |
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393 _id: "sld:default" |
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394 noLinkCheck: true |
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395 - name: valueFrom |
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396 type: |
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397 - "null" |
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398 - string |
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399 - Expression |
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400 jsonldPredicate: "cwl:valueFrom" |
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401 doc: | |
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402 To use valueFrom, [StepInputExpressionRequirement](#StepInputExpressionRequirement) must |
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403 be specified in the workflow or workflow step requirements. |
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404 |
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405 If `valueFrom` is a constant string value, use this as the value for |
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406 this input parameter. |
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407 |
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408 If `valueFrom` is a parameter reference or expression, it must be |
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409 evaluated to yield the actual value to be assiged to the input field. |
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410 |
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411 The `self` value in the parameter reference or expression must be |
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412 1. `null` if there is no `source` field |
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413 2. the value of the parameter(s) specified in the `source` field when this |
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414 workflow input parameter **is not** specified in this workflow step's `scatter` field. |
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415 3. an element of the parameter specified in the `source` field when this workflow input |
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416 parameter **is** specified in this workflow step's `scatter` field. |
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417 |
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418 The value of `inputs` in the parameter reference or expression must be |
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419 the input object to the workflow step after assigning the `source` |
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420 values, applying `default`, and then scattering. The order of |
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421 evaluating `valueFrom` among step input parameters is undefined and the |
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422 result of evaluating `valueFrom` on a parameter must not be visible to |
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423 evaluation of `valueFrom` on other parameters. |
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424 |
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425 |
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426 - type: record |
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427 name: WorkflowStepOutput |
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428 docParent: "#WorkflowStep" |
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429 extends: Identified |
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430 doc: | |
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431 Associate an output parameter of the underlying process with a workflow |
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432 parameter. The workflow parameter (given in the `id` field) be may be used |
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433 as a `source` to connect with input parameters of other workflow steps, or |
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434 with an output parameter of the process. |
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435 |
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436 A unique identifier for this workflow output parameter. This is |
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437 the identifier to use in the `source` field of `WorkflowStepInput` |
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438 to connect the output value to downstream parameters. |
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439 |
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440 |
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441 - name: ScatterMethod |
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442 type: enum |
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443 docParent: "#WorkflowStep" |
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444 doc: The scatter method, as described in [workflow step scatter](#WorkflowStep). |
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445 symbols: |
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446 - dotproduct |
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447 - nested_crossproduct |
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448 - flat_crossproduct |
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449 |
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450 |
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451 - name: WorkflowStep |
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452 type: record |
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453 extends: [Identified, Labeled, sld:Documented] |
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454 docParent: "#Workflow" |
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455 doc: | |
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456 A workflow step is an executable element of a workflow. It specifies the |
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457 underlying process implementation (such as `CommandLineTool` or another |
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458 `Workflow`) in the `run` field and connects the input and output parameters |
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459 of the underlying process to workflow parameters. |
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460 |
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461 # Scatter/gather |
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462 |
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463 To use scatter/gather, |
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464 [ScatterFeatureRequirement](#ScatterFeatureRequirement) must be specified |
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465 in the workflow or workflow step requirements. |
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466 |
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467 A "scatter" operation specifies that the associated workflow step or |
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468 subworkflow should execute separately over a list of input elements. Each |
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469 job making up a scatter operation is independent and may be executed |
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470 concurrently. |
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471 |
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472 The `scatter` field specifies one or more input parameters which will be |
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473 scattered. An input parameter may be listed more than once. The declared |
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474 type of each input parameter is implicitly becomes an array of items of the |
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475 input parameter type. If a parameter is listed more than once, it becomes |
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476 a nested array. As a result, upstream parameters which are connected to |
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477 scattered parameters must be arrays. |
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478 |
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479 All output parameter types are also implicitly wrapped in arrays. Each job |
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480 in the scatter results in an entry in the output array. |
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481 |
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482 If any scattered parameter runtime value is an empty array, all outputs are |
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483 set to empty arrays and no work is done for the step, according to |
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484 applicable scattering rules. |
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485 |
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486 If `scatter` declares more than one input parameter, `scatterMethod` |
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487 describes how to decompose the input into a discrete set of jobs. |
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488 |
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489 * **dotproduct** specifies that each of the input arrays are aligned and one |
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490 element taken from each array to construct each job. It is an error |
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491 if all input arrays are not the same length. |
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492 |
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493 * **nested_crossproduct** specifies the Cartesian product of the inputs, |
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494 producing a job for every combination of the scattered inputs. The |
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495 output must be nested arrays for each level of scattering, in the |
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496 order that the input arrays are listed in the `scatter` field. |
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497 |
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498 * **flat_crossproduct** specifies the Cartesian product of the inputs, |
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499 producing a job for every combination of the scattered inputs. The |
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500 output arrays must be flattened to a single level, but otherwise listed in the |
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501 order that the input arrays are listed in the `scatter` field. |
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502 |
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503 # Conditional execution |
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504 |
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505 Conditional execution makes execution of a step conditional on an |
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506 expression. A step that is not executed is "skipped". A skipped |
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507 step produces `null` for all output parameters. |
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508 |
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509 The condition is evaluated after `scatter`, using the input object |
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510 of each individual scatter job. This means over a set of scatter |
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511 jobs, some may be executed and some may be skipped. When the |
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512 results are gathered, skipped steps must be `null` in the output |
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513 arrays. |
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514 |
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515 The `when` field controls conditional execution. This is an |
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516 expression that must be evaluated with `inputs` bound to the step |
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517 input object (or individual scatter job), and returns a boolean |
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518 value. It is an error if this expression returns a value other |
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519 than `true` or `false`. |
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520 |
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521 # Subworkflows |
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522 |
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523 To specify a nested workflow as part of a workflow step, |
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524 [SubworkflowFeatureRequirement](#SubworkflowFeatureRequirement) must be |
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525 specified in the workflow or workflow step requirements. |
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526 |
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527 It is a fatal error if a workflow directly or indirectly invokes itself as |
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528 a subworkflow (recursive workflows are not allowed). |
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529 |
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530 fields: |
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531 - name: in |
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532 type: WorkflowStepInput[] |
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533 jsonldPredicate: |
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534 _id: "cwl:in" |
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535 mapSubject: id |
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536 mapPredicate: source |
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537 doc: | |
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538 Defines the input parameters of the workflow step. The process is ready to |
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539 run when all required input parameters are associated with concrete |
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540 values. Input parameters include a schema for each parameter which is |
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541 used to validate the input object. It may also be used build a user |
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542 interface for constructing the input object. |
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543 - name: out |
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544 type: |
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545 - type: array |
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546 items: [string, WorkflowStepOutput] |
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547 jsonldPredicate: |
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548 _id: "cwl:out" |
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549 _type: "@id" |
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550 identity: true |
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551 doc: | |
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552 Defines the parameters representing the output of the process. May be |
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553 used to generate and/or validate the output object. |
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554 - name: requirements |
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555 type: ProcessRequirement[]? |
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556 jsonldPredicate: |
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557 _id: "cwl:requirements" |
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558 mapSubject: class |
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559 doc: | |
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560 Declares requirements that apply to either the runtime environment or the |
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561 workflow engine that must be met in order to execute this workflow step. If |
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562 an implementation cannot satisfy all requirements, or a requirement is |
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563 listed which is not recognized by the implementation, it is a fatal |
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564 error and the implementation must not attempt to run the process, |
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565 unless overridden at user option. |
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566 - name: hints |
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567 type: Any[]? |
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568 jsonldPredicate: |
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569 _id: "cwl:hints" |
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570 noLinkCheck: true |
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571 mapSubject: class |
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572 doc: | |
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573 Declares hints applying to either the runtime environment or the |
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574 workflow engine that may be helpful in executing this workflow step. It is |
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575 not an error if an implementation cannot satisfy all hints, however |
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576 the implementation may report a warning. |
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577 - name: run |
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578 type: [string, Process] |
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579 jsonldPredicate: |
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580 _id: "cwl:run" |
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581 _type: "@id" |
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582 subscope: run |
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583 doc: | |
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584 Specifies the process to run. |
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585 - name: when |
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586 type: |
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587 - "null" |
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588 - Expression |
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589 jsonldPredicate: "cwl:when" |
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590 doc: | |
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591 If defined, only run the step when the expression evaluates to |
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592 `true`. If `false` the step is skipped. A skipped step |
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593 produces a `null` on each output. |
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594 - name: scatter |
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595 type: |
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596 - string? |
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597 - string[]? |
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598 jsonldPredicate: |
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599 "_id": "cwl:scatter" |
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600 "_type": "@id" |
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601 "_container": "@list" |
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602 refScope: 0 |
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603 - name: scatterMethod |
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604 doc: | |
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605 Required if `scatter` is an array of more than one element. |
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606 type: ScatterMethod? |
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607 jsonldPredicate: |
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608 "_id": "cwl:scatterMethod" |
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609 "_type": "@vocab" |
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610 |
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611 |
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612 - name: Workflow |
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613 type: record |
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614 extends: "#Process" |
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615 documentRoot: true |
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616 specialize: |
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617 - specializeFrom: InputParameter |
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618 specializeTo: WorkflowInputParameter |
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619 - specializeFrom: OutputParameter |
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620 specializeTo: WorkflowOutputParameter |
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621 doc: | |
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622 A workflow describes a set of **steps** and the **dependencies** between |
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623 those steps. When a step produces output that will be consumed by a |
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624 second step, the first step is a dependency of the second step. |
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625 |
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626 When there is a dependency, the workflow engine must execute the preceeding |
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627 step and wait for it to successfully produce output before executing the |
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628 dependent step. If two steps are defined in the workflow graph that |
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629 are not directly or indirectly dependent, these steps are **independent**, |
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630 and may execute in any order or execute concurrently. A workflow is |
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631 complete when all steps have been executed. |
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632 |
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633 Dependencies between parameters are expressed using the `source` field on |
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634 [workflow step input parameters](#WorkflowStepInput) and [workflow output |
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635 parameters](#WorkflowOutputParameter). |
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636 |
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637 The `source` field expresses the dependency of one parameter on another |
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638 such that when a value is associated with the parameter specified by |
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639 `source`, that value is propagated to the destination parameter. When all |
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640 data links inbound to a given step are fufilled, the step is ready to |
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641 execute. |
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642 |
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643 ## Workflow success and failure |
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644 |
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645 A completed step must result in one of `success`, `temporaryFailure` or |
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646 `permanentFailure` states. An implementation may choose to retry a step |
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647 execution which resulted in `temporaryFailure`. An implementation may |
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648 choose to either continue running other steps of a workflow, or terminate |
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649 immediately upon `permanentFailure`. |
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650 |
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651 * If any step of a workflow execution results in `permanentFailure`, then |
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652 the workflow status is `permanentFailure`. |
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653 |
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654 * If one or more steps result in `temporaryFailure` and all other steps |
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655 complete `success` or are not executed, then the workflow status is |
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656 `temporaryFailure`. |
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657 |
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658 * If all workflow steps are executed and complete with `success`, then the |
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659 workflow status is `success`. |
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660 |
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661 # Extensions |
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662 |
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663 [ScatterFeatureRequirement](#ScatterFeatureRequirement) and |
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664 [SubworkflowFeatureRequirement](#SubworkflowFeatureRequirement) are |
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665 available as standard [extensions](#Extensions_and_Metadata) to core |
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666 workflow semantics. |
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667 |
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668 fields: |
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669 - name: "class" |
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670 jsonldPredicate: |
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671 "_id": "@type" |
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672 "_type": "@vocab" |
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673 type: string |
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674 - name: steps |
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675 doc: | |
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676 The individual steps that make up the workflow. Each step is executed when all of its |
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677 input data links are fufilled. An implementation may choose to execute |
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678 the steps in a different order than listed and/or execute steps |
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679 concurrently, provided that dependencies between steps are met. |
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680 type: |
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681 - type: array |
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682 items: "#WorkflowStep" |
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683 jsonldPredicate: |
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684 mapSubject: id |
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685 |
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686 |
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687 - type: record |
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688 name: SubworkflowFeatureRequirement |
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689 extends: ProcessRequirement |
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690 doc: | |
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691 Indicates that the workflow platform must support nested workflows in |
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692 the `run` field of [WorkflowStep](#WorkflowStep). |
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693 fields: |
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694 - name: "class" |
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695 type: "string" |
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696 doc: "Always 'SubworkflowFeatureRequirement'" |
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697 jsonldPredicate: |
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698 "_id": "@type" |
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699 "_type": "@vocab" |
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700 |
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701 - name: ScatterFeatureRequirement |
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702 type: record |
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703 extends: ProcessRequirement |
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704 doc: | |
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705 Indicates that the workflow platform must support the `scatter` and |
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706 `scatterMethod` fields of [WorkflowStep](#WorkflowStep). |
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707 fields: |
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708 - name: "class" |
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709 type: "string" |
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710 doc: "Always 'ScatterFeatureRequirement'" |
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711 jsonldPredicate: |
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712 "_id": "@type" |
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713 "_type": "@vocab" |
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714 |
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715 - name: MultipleInputFeatureRequirement |
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716 type: record |
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717 extends: ProcessRequirement |
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718 doc: | |
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719 Indicates that the workflow platform must support multiple inbound data links |
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720 listed in the `source` field of [WorkflowStepInput](#WorkflowStepInput). |
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721 fields: |
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722 - name: "class" |
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723 type: "string" |
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724 doc: "Always 'MultipleInputFeatureRequirement'" |
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725 jsonldPredicate: |
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726 "_id": "@type" |
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727 "_type": "@vocab" |
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728 |
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729 - type: record |
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730 name: StepInputExpressionRequirement |
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731 extends: ProcessRequirement |
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732 doc: | |
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733 Indicate that the workflow platform must support the `valueFrom` field |
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734 of [WorkflowStepInput](#WorkflowStepInput). |
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735 fields: |
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736 - name: "class" |
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737 type: "string" |
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738 doc: "Always 'StepInputExpressionRequirement'" |
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739 jsonldPredicate: |
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740 "_id": "@type" |
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741 "_type": "@vocab" |
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742 |
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743 - {$import: Operation.yml} |