Mercurial > repos > shellac > sam_consensus_v3
annotate env/lib/python3.9/site-packages/cwltool/tests/wf/iwdr_permutations.cwl @ 0:4f3585e2f14b draft default tip
"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
author | shellac |
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date | Mon, 22 Mar 2021 18:12:50 +0000 |
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1 #!/usr/bin/env cwl-runner |
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2 class: CommandLineTool |
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3 cwlVersion: v1.2.0-dev4 |
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4 requirements: |
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5 DockerRequirement: |
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6 dockerPull: debian |
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7 InitialWorkDirRequirement: |
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8 listing: |
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9 - entry: $(inputs.first) |
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10 entryname: first_writable_file |
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11 writable: true |
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12 - entry: $(inputs.second) |
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13 entryname: second_read_only_file |
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14 writable: false |
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15 - entry: $(inputs.third) |
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16 entryname: /my_path/third_writable_file |
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17 writable: true |
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18 - entry: $(inputs.fourth) |
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19 entryname: /my_other_path/fourth_read_only_file |
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20 writable: false |
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21 - entry: $(inputs.fifth) |
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22 entryname: fifth_writable_directory |
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23 writable: true |
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24 - entry: $(inputs.sixth) |
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25 entryname: sixth_read_only_directory |
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26 writable: false |
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27 - entry: $(inputs.seventh) |
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28 entryname: /my_path/seventh_writable_directory |
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29 writable: true |
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30 - entry: $(inputs.eighth) |
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31 entryname: /my_other_path/eighth_read_only_directory |
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32 writable: false |
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33 - entry: $(inputs.ninth) |
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34 entryname: nineth_writable_directory_literal |
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35 writable: true |
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36 - entry: $(inputs.tenth) |
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37 entryname: /my_path/tenth_writable_directory_literal |
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38 writable: true |
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39 - entry: baz |
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40 entryname: /my_path/my_file_literal |
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41 inputs: |
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42 first: File |
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43 second: File |
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44 third: File |
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45 fourth: File |
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46 fifth: Directory |
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47 sixth: Directory |
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48 seventh: Directory |
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49 eighth: Directory |
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50 ninth: |
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51 type: Directory |
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52 default: |
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53 class: Directory |
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54 basename: foo |
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55 listing: [] |
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56 tenth: |
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57 type: Directory |
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58 default: |
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59 class: Directory |
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60 basename: bar |
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61 listing: [] |
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62 outputs: |
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63 out: |
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64 type: Directory |
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65 outputBinding: |
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66 glob: . |
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67 baseCommand: [bash, -c] |
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68 arguments: |
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69 - | |
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70 find . |
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71 find /my_path |
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72 find /my_other_path |
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73 echo "a" > first_writable_file |
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74 echo "b" > /my_path/third_writable_file |
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75 touch fifth_writable_directory/c |
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76 touch /my_path/seventh_writable_directory/d |