Mercurial > repos > shellac > sam_consensus_v3
annotate env/lib/python3.9/site-packages/cwltool/tests/wf/nested.cwl @ 0:4f3585e2f14b draft default tip
"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
author | shellac |
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date | Mon, 22 Mar 2021 18:12:50 +0000 |
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"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
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1 #!/usr/bin/env cwl-runner |
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2 |
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3 cwlVersion: v1.0 |
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4 class: Workflow |
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5 label: "Nested workflow example" |
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6 |
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7 inputs: [] |
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8 |
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9 outputs: |
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10 classout: |
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11 type: File |
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12 outputSource: compile/classout |
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13 |
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14 requirements: |
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15 - class: SubworkflowFeatureRequirement |
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16 |
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17 steps: |
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18 compile: |
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19 run: 1st-workflow.cwl |
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20 in: |
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21 inp: |
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22 source: create-tar/tar |
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23 ex: |
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24 default: "Hello.java" |
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25 out: [classout] |
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26 |
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27 create-tar: |
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28 requirements: |
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29 - class: InitialWorkDirRequirement |
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30 listing: |
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31 - entryname: Hello.java |
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32 entry: | |
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33 public class Hello { |
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34 public static void main(String[] argv) { |
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35 System.out.println("Hello from Java"); |
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36 } |
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37 } |
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38 in: [] |
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39 out: [tar] |
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40 run: |
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41 class: CommandLineTool |
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42 requirements: |
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43 - class: ShellCommandRequirement |
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44 arguments: |
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45 - shellQuote: false |
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46 valueFrom: | |
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47 date |
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48 tar cf hello.tar Hello.java |
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49 date |
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50 inputs: [] |
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51 outputs: |
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52 tar: |
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53 type: File |
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54 outputBinding: |
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55 glob: "hello.tar" |