annotate env/lib/python3.9/site-packages/networkx/algorithms/operators/all.py @ 0:4f3585e2f14b draft default tip

"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
author shellac
date Mon, 22 Mar 2021 18:12:50 +0000
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1 """Operations on many graphs.
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2 """
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3 from itertools import zip_longest
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4 import networkx as nx
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5
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6 __all__ = ["union_all", "compose_all", "disjoint_union_all", "intersection_all"]
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7
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8
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9 def union_all(graphs, rename=(None,)):
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10 """Returns the union of all graphs.
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11
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12 The graphs must be disjoint, otherwise an exception is raised.
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13
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14 Parameters
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15 ----------
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16 graphs : list of graphs
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17 List of NetworkX graphs
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18
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19 rename : bool , default=(None, None)
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20 Node names of G and H can be changed by specifying the tuple
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21 rename=('G-','H-') (for example). Node "u" in G is then renamed
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22 "G-u" and "v" in H is renamed "H-v".
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23
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24 Returns
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25 -------
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26 U : a graph with the same type as the first graph in list
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27
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28 Raises
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29 ------
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30 ValueError
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31 If `graphs` is an empty list.
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32
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33 Notes
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34 -----
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35 To force a disjoint union with node relabeling, use
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36 disjoint_union_all(G,H) or convert_node_labels_to integers().
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37
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38 Graph, edge, and node attributes are propagated to the union graph.
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39 If a graph attribute is present in multiple graphs, then the value
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40 from the last graph in the list with that attribute is used.
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41
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42 See Also
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43 --------
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44 union
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45 disjoint_union_all
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46 """
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47 if not graphs:
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48 raise ValueError("cannot apply union_all to an empty list")
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49 graphs_names = zip_longest(graphs, rename)
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50 U, gname = next(graphs_names)
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51 for H, hname in graphs_names:
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52 U = nx.union(U, H, (gname, hname))
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53 gname = None
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54 return U
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55
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56
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57 def disjoint_union_all(graphs):
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58 """Returns the disjoint union of all graphs.
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59
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60 This operation forces distinct integer node labels starting with 0
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61 for the first graph in the list and numbering consecutively.
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62
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63 Parameters
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64 ----------
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65 graphs : list
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66 List of NetworkX graphs
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67
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68 Returns
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69 -------
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70 U : A graph with the same type as the first graph in list
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71
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72 Raises
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73 ------
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74 ValueError
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75 If `graphs` is an empty list.
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76
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77 Notes
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78 -----
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79 It is recommended that the graphs be either all directed or all undirected.
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80
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81 Graph, edge, and node attributes are propagated to the union graph.
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82 If a graph attribute is present in multiple graphs, then the value
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83 from the last graph in the list with that attribute is used.
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84 """
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85 if not graphs:
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86 raise ValueError("cannot apply disjoint_union_all to an empty list")
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87 graphs = iter(graphs)
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88 U = next(graphs)
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89 for H in graphs:
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90 U = nx.disjoint_union(U, H)
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91 return U
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92
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93
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94 def compose_all(graphs):
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95 """Returns the composition of all graphs.
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96
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97 Composition is the simple union of the node sets and edge sets.
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98 The node sets of the supplied graphs need not be disjoint.
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99
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100 Parameters
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101 ----------
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102 graphs : list
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103 List of NetworkX graphs
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104
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105 Returns
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106 -------
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107 C : A graph with the same type as the first graph in list
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108
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109 Raises
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110 ------
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111 ValueError
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112 If `graphs` is an empty list.
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113
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114 Notes
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115 -----
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116 It is recommended that the supplied graphs be either all directed or all
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117 undirected.
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118
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119 Graph, edge, and node attributes are propagated to the union graph.
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120 If a graph attribute is present in multiple graphs, then the value
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121 from the last graph in the list with that attribute is used.
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122 """
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123 if not graphs:
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124 raise ValueError("cannot apply compose_all to an empty list")
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125 graphs = iter(graphs)
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126 C = next(graphs)
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127 for H in graphs:
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128 C = nx.compose(C, H)
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129 return C
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130
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131
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132 def intersection_all(graphs):
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133 """Returns a new graph that contains only the edges that exist in
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134 all graphs.
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135
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136 All supplied graphs must have the same node set.
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137
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138 Parameters
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139 ----------
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140 graphs : list
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141 List of NetworkX graphs
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142
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143 Returns
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144 -------
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145 R : A new graph with the same type as the first graph in list
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146
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147 Raises
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148 ------
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149 ValueError
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150 If `graphs` is an empty list.
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151
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152 Notes
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153 -----
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154 Attributes from the graph, nodes, and edges are not copied to the new
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155 graph.
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156 """
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157 if not graphs:
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158 raise ValueError("cannot apply intersection_all to an empty list")
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159 graphs = iter(graphs)
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160 R = next(graphs)
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161 for H in graphs:
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162 R = nx.intersection(R, H)
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163 return R