annotate env/lib/python3.9/site-packages/networkx/algorithms/tests/test_richclub.py @ 0:4f3585e2f14b draft default tip

"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
author shellac
date Mon, 22 Mar 2021 18:12:50 +0000
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1 import pytest
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2 import networkx as nx
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3
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4
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5 def test_richclub():
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6 G = nx.Graph([(0, 1), (0, 2), (1, 2), (1, 3), (1, 4), (4, 5)])
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7 rc = nx.richclub.rich_club_coefficient(G, normalized=False)
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8 assert rc == {0: 12.0 / 30, 1: 8.0 / 12}
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9
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10 # test single value
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11 rc0 = nx.richclub.rich_club_coefficient(G, normalized=False)[0]
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12 assert rc0 == 12.0 / 30.0
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13
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14
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15 def test_richclub_seed():
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16 G = nx.Graph([(0, 1), (0, 2), (1, 2), (1, 3), (1, 4), (4, 5)])
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17 rcNorm = nx.richclub.rich_club_coefficient(G, Q=2, seed=1)
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18 assert rcNorm == {0: 1.0, 1: 1.0}
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19
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20
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21 def test_richclub_normalized():
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22 G = nx.Graph([(0, 1), (0, 2), (1, 2), (1, 3), (1, 4), (4, 5)])
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23 rcNorm = nx.richclub.rich_club_coefficient(G, Q=2)
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24 assert rcNorm == {0: 1.0, 1: 1.0}
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25
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26
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27 def test_richclub2():
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28 T = nx.balanced_tree(2, 10)
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29 rc = nx.richclub.rich_club_coefficient(T, normalized=False)
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30 assert rc == {
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31 0: 4092 / (2047 * 2046.0),
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32 1: (2044.0 / (1023 * 1022)),
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33 2: (2040.0 / (1022 * 1021)),
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34 }
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35
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36
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37 def test_richclub3():
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38 # tests edgecase
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39 G = nx.karate_club_graph()
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40 rc = nx.rich_club_coefficient(G, normalized=False)
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41 assert rc == {
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42 0: 156.0 / 1122,
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43 1: 154.0 / 1056,
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44 2: 110.0 / 462,
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45 3: 78.0 / 240,
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46 4: 44.0 / 90,
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47 5: 22.0 / 42,
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48 6: 10.0 / 20,
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49 7: 10.0 / 20,
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50 8: 10.0 / 20,
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51 9: 6.0 / 12,
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52 10: 2.0 / 6,
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53 11: 2.0 / 6,
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54 12: 0.0,
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55 13: 0.0,
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56 14: 0.0,
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57 15: 0.0,
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58 }
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59
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60
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61 def test_richclub4():
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62 G = nx.Graph()
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63 G.add_edges_from(
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64 [(0, 1), (0, 2), (0, 3), (0, 4), (4, 5), (5, 9), (6, 9), (7, 9), (8, 9)]
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65 )
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66 rc = nx.rich_club_coefficient(G, normalized=False)
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67 assert rc == {0: 18 / 90.0, 1: 6 / 12.0, 2: 0.0, 3: 0.0}
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68
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69
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70 def test_richclub_exception():
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71 with pytest.raises(nx.NetworkXNotImplemented):
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72 G = nx.DiGraph()
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73 nx.rich_club_coefficient(G)
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74
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75
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76 def test_rich_club_exception2():
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77 with pytest.raises(nx.NetworkXNotImplemented):
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78 G = nx.MultiGraph()
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79 nx.rich_club_coefficient(G)
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80
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81
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82 # def test_richclub2_normalized():
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83 # T = nx.balanced_tree(2,10)
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84 # rcNorm = nx.richclub.rich_club_coefficient(T,Q=2)
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85 # assert_true(rcNorm[0] ==1.0 and rcNorm[1] < 0.9 and rcNorm[2] < 0.9)