annotate env/lib/python3.9/site-packages/networkx/readwrite/tests/test_graph6.py @ 0:4f3585e2f14b draft default tip

"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
author shellac
date Mon, 22 Mar 2021 18:12:50 +0000
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1 from io import BytesIO
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2 import tempfile
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3 import pytest
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4
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5 import networkx as nx
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6 import networkx.readwrite.graph6 as g6
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7 from networkx.testing.utils import assert_edges_equal
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8 from networkx.testing.utils import assert_nodes_equal
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9
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10
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11 class TestGraph6Utils:
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12 def test_n_data_n_conversion(self):
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13 for i in [0, 1, 42, 62, 63, 64, 258047, 258048, 7744773, 68719476735]:
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14 assert g6.data_to_n(g6.n_to_data(i))[0] == i
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15 assert g6.data_to_n(g6.n_to_data(i))[1] == []
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16 assert g6.data_to_n(g6.n_to_data(i) + [42, 43])[1] == [42, 43]
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17
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18
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19 class TestFromGraph6Bytes:
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20 def test_from_graph6_bytes(self):
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21 data = b"DF{"
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22 G = nx.from_graph6_bytes(data)
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23 assert_nodes_equal(G.nodes(), [0, 1, 2, 3, 4])
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24 assert_edges_equal(
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25 G.edges(), [(0, 3), (0, 4), (1, 3), (1, 4), (2, 3), (2, 4), (3, 4)]
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26 )
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27
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28 def test_read_equals_from_bytes(self):
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29 data = b"DF{"
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30 G = nx.from_graph6_bytes(data)
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31 fh = BytesIO(data)
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32 Gin = nx.read_graph6(fh)
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33 assert_nodes_equal(G.nodes(), Gin.nodes())
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34 assert_edges_equal(G.edges(), Gin.edges())
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35
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36
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37 class TestReadGraph6:
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38 def test_read_many_graph6(self):
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39 """Test for reading many graphs from a file into a list."""
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40 data = b"DF{\nD`{\nDqK\nD~{\n"
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41 fh = BytesIO(data)
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42 glist = nx.read_graph6(fh)
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43 assert len(glist) == 4
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44 for G in glist:
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45 assert sorted(G) == list(range(5))
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46
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47
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48 class TestWriteGraph6:
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49 """Unit tests for writing a graph to a file in graph6 format."""
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50
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51 def test_null_graph(self):
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52 result = BytesIO()
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53 nx.write_graph6(nx.null_graph(), result)
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54 assert result.getvalue() == b">>graph6<<?\n"
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55
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56 def test_trivial_graph(self):
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57 result = BytesIO()
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58 nx.write_graph6(nx.trivial_graph(), result)
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59 assert result.getvalue() == b">>graph6<<@\n"
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60
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61 def test_complete_graph(self):
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62 result = BytesIO()
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63 nx.write_graph6(nx.complete_graph(4), result)
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64 assert result.getvalue() == b">>graph6<<C~\n"
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65
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66 def test_large_complete_graph(self):
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67 result = BytesIO()
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68 nx.write_graph6(nx.complete_graph(67), result, header=False)
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69 assert result.getvalue() == b"~?@B" + b"~" * 368 + b"w\n"
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70
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71 def test_no_header(self):
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72 result = BytesIO()
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73 nx.write_graph6(nx.complete_graph(4), result, header=False)
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74 assert result.getvalue() == b"C~\n"
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75
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76 def test_complete_bipartite_graph(self):
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77 result = BytesIO()
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78 G = nx.complete_bipartite_graph(6, 9)
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79 nx.write_graph6(G, result, header=False)
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80 # The expected encoding here was verified by Sage.
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81 assert result.getvalue() == b"N??F~z{~Fw^_~?~?^_?\n"
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82
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83 def test_no_directed_graphs(self):
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84 with pytest.raises(nx.NetworkXNotImplemented):
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85 nx.write_graph6(nx.DiGraph(), BytesIO())
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86
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87 def test_length(self):
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88 for i in list(range(13)) + [31, 47, 62, 63, 64, 72]:
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89 g = nx.random_graphs.gnm_random_graph(i, i * i // 4, seed=i)
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90 gstr = BytesIO()
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91 nx.write_graph6(g, gstr, header=False)
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92 # Strip the trailing newline.
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93 gstr = gstr.getvalue().rstrip()
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94 assert len(gstr) == ((i - 1) * i // 2 + 5) // 6 + (1 if i < 63 else 4)
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95
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96 def test_roundtrip(self):
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97 for i in list(range(13)) + [31, 47, 62, 63, 64, 72]:
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98 G = nx.random_graphs.gnm_random_graph(i, i * i // 4, seed=i)
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99 f = BytesIO()
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100 nx.write_graph6(G, f)
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101 f.seek(0)
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102 H = nx.read_graph6(f)
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103 assert_nodes_equal(G.nodes(), H.nodes())
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104 assert_edges_equal(G.edges(), H.edges())
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105
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106 def test_write_path(self):
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107 with tempfile.NamedTemporaryFile() as f:
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108 g6.write_graph6_file(nx.null_graph(), f)
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109 f.seek(0)
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110 assert f.read() == b">>graph6<<?\n"
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111
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112 def test_relabeling(self):
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113 G = nx.Graph([(0, 1)])
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114 assert g6.to_graph6_bytes(G) == b">>graph6<<A_\n"
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115 G = nx.Graph([(1, 2)])
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116 assert g6.to_graph6_bytes(G) == b">>graph6<<A_\n"
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117 G = nx.Graph([(1, 42)])
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118 assert g6.to_graph6_bytes(G) == b">>graph6<<A_\n"