Mercurial > repos > shellac > sam_consensus_v3
annotate env/lib/python3.9/site-packages/planemo/commands/cmd_conda_init.py @ 0:4f3585e2f14b draft default tip
"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
author | shellac |
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date | Mon, 22 Mar 2021 18:12:50 +0000 |
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"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
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1 """Module describing the planemo ``conda_init`` command.""" |
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2 import click |
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3 from galaxy.tool_util.deps import conda_util |
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4 |
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5 from planemo import options |
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6 from planemo.cli import command_function |
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7 from planemo.conda import build_conda_context |
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8 from planemo.exit_codes import EXIT_CODE_ALREADY_EXISTS |
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9 from planemo.io import info, warn |
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10 |
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11 |
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12 MESSAGE_ERROR_ALREADY_EXISTS = "conda_init failed - Conda appears to already be installed at '%s'" |
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13 MESSAGE_ERROR_FAILED = "conda_init failed - failed to install to '%s'" |
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14 MESSAGE_INSTALL_OKAY = "Conda installation succeeded - Conda is available at '%s'" |
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15 |
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16 |
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17 @click.command('conda_init') |
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18 @options.conda_target_options(include_local=False) # Always use local during init. |
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19 @command_function |
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20 def cli(ctx, **kwds): |
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21 """Download and install conda. |
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22 |
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23 This will download conda for managing dependencies for your platform |
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24 using the appropriate Miniconda installer. |
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25 |
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26 By running this command, you are agreeing to the terms of the conda |
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27 license a 3-clause BSD 3 license. Please review full license at |
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28 http://docs.continuum.io/anaconda/eula. |
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29 |
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30 Planemo will print a warning and terminate with an exit code of 7 |
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31 if Conda is already installed. |
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32 """ |
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33 conda_context = build_conda_context(ctx, **kwds) |
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34 if conda_context.is_conda_installed(): |
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35 warn(MESSAGE_ERROR_ALREADY_EXISTS % conda_context.conda_exec) |
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36 exit = EXIT_CODE_ALREADY_EXISTS |
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37 else: |
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38 exit = conda_util.install_conda(conda_context=conda_context, force_conda_build=True) |
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39 if exit: |
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40 warn(MESSAGE_ERROR_FAILED % conda_context.conda_exec) |
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41 else: |
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42 info(MESSAGE_INSTALL_OKAY % conda_context.conda_exec) |
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43 |
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44 ctx.exit(exit) |