comparison env/lib/python3.9/site-packages/bioblend/galaxy/dataset_collections/__init__.py @ 0:4f3585e2f14b draft default tip

"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"

0:4f3585e2f14b

class HasElements:

    def __init__(self, name, type="list", elements=None):
        self.name = name
        self.type = type
        if isinstance(elements, dict):
            self.elements = [dict(name=key, id=value, src="hda") for key, value in elements.values()]
        elif elements:
            self.elements = elements

    def add(self, element):
        self.elements.append(element)
        return self


class CollectionDescription(HasElements):

    def to_dict(self):
        return dict(
            name=self.name,
            collection_type=self.type,
            element_identifiers=[e.to_dict() for e in self.elements]
        )


class CollectionElement(HasElements):

    def to_dict(self):
        return dict(
            src="new_collection",
            name=self.name,
            collection_type=self.type,
            element_identifiers=[e.to_dict() for e in self.elements]
        )


class SimpleElement:

    def __init__(self, value):
        self.value = value

    def to_dict(self):
        return self.value


class HistoryDatasetElement(SimpleElement):

    def __init__(self, name, id):
        super().__init__(dict(
            name=name,
            src="hda",
            id=id,
        ))


class HistoryDatasetCollectionElement(SimpleElement):

    def __init__(self, name, id):
        super().__init__(dict(
            name=name,
            src="hdca",
            id=id,
        ))


class LibraryDatasetElement(SimpleElement):

    def __init__(self, name, id):
        super().__init__(dict(
            name=name,
            src="ldda",
            id=id,
        ))


__all__ = (
    "CollectionDescription",
    "CollectionElement",
    "HistoryDatasetElement",
    "HistoryDatasetCollectionElement",
    "LibraryDatasetElement",
)