Mercurial > repos > shellac > sam_consensus_v3
comparison env/lib/python3.9/site-packages/cwltool/tests/seqtk_seq_wrong_name.cwl @ 0:4f3585e2f14b draft default tip
"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
author | shellac |
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date | Mon, 22 Mar 2021 18:12:50 +0000 |
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-1:000000000000 | 0:4f3585e2f14b |
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1 #!/usr/bin/env cwl-runner | |
2 cwlVersion: v1.0 | |
3 class: CommandLineTool | |
4 id: "seqtk_seq" | |
5 doc: "Convert to FASTA (seqtk)" | |
6 inputs: | |
7 - id: input1 | |
8 type: File | |
9 inputBinding: | |
10 position: 1 | |
11 prefix: "-a" | |
12 outputs: | |
13 - id: output1 | |
14 type: File | |
15 outputBinding: | |
16 glob: out | |
17 baseCommand: ["seqtk", "seq"] | |
18 arguments: [] | |
19 stdout: out | |
20 hints: | |
21 SoftwareRequirement: | |
22 packages: | |
23 - package: seqtk_seq | |
24 version: | |
25 - '1.2' | |
26 specs: | |
27 - https://anaconda.org/bioconda/seqtk | |
28 - https://packages.debian.org/sid/seqtk |