Mercurial > repos > shellac > sam_consensus_v3
comparison env/lib/python3.9/site-packages/cwltool/tests/wf/mpi_simple_wf.cwl @ 0:4f3585e2f14b draft default tip
"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
author | shellac |
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date | Mon, 22 Mar 2021 18:12:50 +0000 |
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-1:000000000000 | 0:4f3585e2f14b |
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1 #!/usr/bin/env cwl-runner | |
2 | |
3 cwlVersion: v1.1 | |
4 class: Workflow | |
5 doc: | | |
6 Simple 2 step workflow to check that workflow steps are | |
7 independently picking up on the number of processes. First run the | |
8 parallel get PIDs step (on the input num procs) then run (on a | |
9 single proc) the line count. This should equal the input. | |
10 | |
11 inputs: | |
12 processes: | |
13 type: int | |
14 | |
15 steps: | |
16 par_pids: | |
17 run: mpi_expr.cwl | |
18 in: | |
19 processes: processes | |
20 out: | |
21 - pids | |
22 | |
23 count: | |
24 run: mpi_line_count.cwl | |
25 in: | |
26 pid_file: par_pids/pids | |
27 out: | |
28 - line_count | |
29 | |
30 outputs: | |
31 line_count: | |
32 type: File | |
33 outputSource: count/line_count | |
34 |