comparison env/lib/python3.9/site-packages/networkx/drawing/tests/test_pydot.py @ 0:4f3585e2f14b draft default tip

"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"

0:4f3585e2f14b

"""Unit tests for pydot drawing functions."""
from io import StringIO
import tempfile
import networkx as nx
from networkx.testing import assert_graphs_equal

import pytest

pydot = pytest.importorskip("pydot")


class TestPydot:
    def pydot_checks(self, G, prog):
        """
        Validate :mod:`pydot`-based usage of the passed NetworkX graph with the
        passed basename of an external GraphViz command (e.g., `dot`, `neato`).
        """

        # Set the name of this graph to... "G". Failing to do so will
        # subsequently trip an assertion expecting this name.
        G.graph["name"] = "G"

        # Add arbitrary nodes and edges to the passed empty graph.
        G.add_edges_from([("A", "B"), ("A", "C"), ("B", "C"), ("A", "D")])
        G.add_node("E")

        # Validate layout of this graph with the passed GraphViz command.
        graph_layout = nx.nx_pydot.pydot_layout(G, prog=prog)
        assert isinstance(graph_layout, dict)

        # Convert this graph into a "pydot.Dot" instance.
        P = nx.nx_pydot.to_pydot(G)

        # Convert this "pydot.Dot" instance back into a graph of the same type.
        G2 = G.__class__(nx.nx_pydot.from_pydot(P))

        # Validate the original and resulting graphs to be the same.
        assert_graphs_equal(G, G2)

        # Serialize this "pydot.Dot" instance to a temporary file in dot format
        fname = tempfile.mktemp()
        P.write_raw(fname)

        # Deserialize a list of new "pydot.Dot" instances back from this file.
        Pin_list = pydot.graph_from_dot_file(path=fname, encoding="utf-8")

        # Validate this file to contain only one graph.
        assert len(Pin_list) == 1

        # The single "pydot.Dot" instance deserialized from this file.
        Pin = Pin_list[0]

        # Sorted list of all nodes in the original "pydot.Dot" instance.
        n1 = sorted([p.get_name() for p in P.get_node_list()])

        # Sorted list of all nodes in the deserialized "pydot.Dot" instance.
        n2 = sorted([p.get_name() for p in Pin.get_node_list()])

        # Validate these instances to contain the same nodes.
        assert n1 == n2

        # Sorted list of all edges in the original "pydot.Dot" instance.
        e1 = sorted([(e.get_source(), e.get_destination()) for e in P.get_edge_list()])

        # Sorted list of all edges in the original "pydot.Dot" instance.
        e2 = sorted(
            [(e.get_source(), e.get_destination()) for e in Pin.get_edge_list()]
        )

        # Validate these instances to contain the same edges.
        assert e1 == e2

        # Deserialize a new graph of the same type back from this file.
        Hin = nx.nx_pydot.read_dot(fname)
        Hin = G.__class__(Hin)

        # Validate the original and resulting graphs to be the same.
        assert_graphs_equal(G, Hin)

    def test_undirected(self):
        self.pydot_checks(nx.Graph(), prog="neato")

    def test_directed(self):
        self.pydot_checks(nx.DiGraph(), prog="dot")

    def test_read_write(self):
        G = nx.MultiGraph()
        G.graph["name"] = "G"
        G.add_edge("1", "2", key="0")  # read assumes strings
        fh = StringIO()
        nx.nx_pydot.write_dot(G, fh)
        fh.seek(0)
        H = nx.nx_pydot.read_dot(fh)
        assert_graphs_equal(G, H)