comparison env/lib/python3.9/site-packages/networkx/generators/tests/test_lattice.py @ 0:4f3585e2f14b draft default tip

"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
author shellac
date Mon, 22 Mar 2021 18:12:50 +0000
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1 """Unit tests for the :mod:`networkx.generators.lattice` module."""
2
3 import pytest
4
5 import networkx as nx
6 from networkx.testing import assert_edges_equal
7 from itertools import product
8
9
10 class TestGrid2DGraph:
11 """Unit tests for :func:`networkx.generators.lattice.grid_2d_graph`"""
12
13 def test_number_of_vertices(self):
14 m, n = 5, 6
15 G = nx.grid_2d_graph(m, n)
16 assert len(G) == m * n
17
18 def test_degree_distribution(self):
19 m, n = 5, 6
20 G = nx.grid_2d_graph(m, n)
21 expected_histogram = [0, 0, 4, 2 * (m + n) - 8, (m - 2) * (n - 2)]
22 assert nx.degree_histogram(G) == expected_histogram
23
24 def test_directed(self):
25 m, n = 5, 6
26 G = nx.grid_2d_graph(m, n)
27 H = nx.grid_2d_graph(m, n, create_using=nx.DiGraph())
28 assert H.succ == G.adj
29 assert H.pred == G.adj
30
31 def test_multigraph(self):
32 m, n = 5, 6
33 G = nx.grid_2d_graph(m, n)
34 H = nx.grid_2d_graph(m, n, create_using=nx.MultiGraph())
35 assert list(H.edges()) == list(G.edges())
36
37 def test_periodic(self):
38 G = nx.grid_2d_graph(0, 0, periodic=True)
39 assert dict(G.degree()) == {}
40
41 for m, n, H in [
42 (2, 2, nx.cycle_graph(4)),
43 (1, 7, nx.cycle_graph(7)),
44 (7, 1, nx.cycle_graph(7)),
45 (2, 5, nx.circular_ladder_graph(5)),
46 (5, 2, nx.circular_ladder_graph(5)),
47 (2, 4, nx.cubical_graph()),
48 (4, 2, nx.cubical_graph()),
49 ]:
50 G = nx.grid_2d_graph(m, n, periodic=True)
51 assert nx.could_be_isomorphic(G, H)
52
53 def test_periodic_iterable(self):
54 m, n = 3, 7
55 for a, b in product([0, 1], [0, 1]):
56 G = nx.grid_2d_graph(m, n, periodic=(a, b))
57 assert G.number_of_nodes() == m * n
58 assert G.number_of_edges() == (m + a - 1) * n + (n + b - 1) * m
59
60 def test_periodic_directed(self):
61 G = nx.grid_2d_graph(4, 2, periodic=True)
62 H = nx.grid_2d_graph(4, 2, periodic=True, create_using=nx.DiGraph())
63 assert H.succ == G.adj
64 assert H.pred == G.adj
65
66 def test_periodic_multigraph(self):
67 G = nx.grid_2d_graph(4, 2, periodic=True)
68 H = nx.grid_2d_graph(4, 2, periodic=True, create_using=nx.MultiGraph())
69 assert list(G.edges()) == list(H.edges())
70
71 def test_node_input(self):
72 G = nx.grid_2d_graph(4, 2, periodic=True)
73 H = nx.grid_2d_graph(range(4), range(2), periodic=True)
74 assert nx.is_isomorphic(H, G)
75 H = nx.grid_2d_graph("abcd", "ef", periodic=True)
76 assert nx.is_isomorphic(H, G)
77 G = nx.grid_2d_graph(5, 6)
78 H = nx.grid_2d_graph(range(5), range(6))
79 assert_edges_equal(H, G)
80
81
82 class TestGridGraph:
83 """Unit tests for :func:`networkx.generators.lattice.grid_graph`"""
84
85 def test_grid_graph(self):
86 """grid_graph([n,m]) is a connected simple graph with the
87 following properties:
88 number_of_nodes = n*m
89 degree_histogram = [0,0,4,2*(n+m)-8,(n-2)*(m-2)]
90 """
91 for n, m in [(3, 5), (5, 3), (4, 5), (5, 4)]:
92 dim = [n, m]
93 g = nx.grid_graph(dim)
94 assert len(g) == n * m
95 assert nx.degree_histogram(g) == [
96 0,
97 0,
98 4,
99 2 * (n + m) - 8,
100 (n - 2) * (m - 2),
101 ]
102
103 for n, m in [(1, 5), (5, 1)]:
104 dim = [n, m]
105 g = nx.grid_graph(dim)
106 assert len(g) == n * m
107 assert nx.is_isomorphic(g, nx.path_graph(5))
108
109 # mg = nx.grid_graph([n,m], create_using=MultiGraph())
110 # assert_equal(mg.edges(), g.edges())
111
112 def test_node_input(self):
113 G = nx.grid_graph([range(7, 9), range(3, 6)])
114 assert len(G) == 2 * 3
115 assert nx.is_isomorphic(G, nx.grid_graph([2, 3]))
116
117 def test_periodic_iterable(self):
118 m, n, k = 3, 7, 5
119 for a, b, c in product([0, 1], [0, 1], [0, 1]):
120 G = nx.grid_graph([m, n, k], periodic=(a, b, c))
121 num_e = (m + a - 1) * n * k + (n + b - 1) * m * k + (k + c - 1) * m * n
122 assert G.number_of_nodes() == m * n * k
123 assert G.number_of_edges() == num_e
124
125
126 class TestHypercubeGraph:
127 """Unit tests for :func:`networkx.generators.lattice.hypercube_graph`"""
128
129 def test_special_cases(self):
130 for n, H in [
131 (0, nx.null_graph()),
132 (1, nx.path_graph(2)),
133 (2, nx.cycle_graph(4)),
134 (3, nx.cubical_graph()),
135 ]:
136 G = nx.hypercube_graph(n)
137 assert nx.could_be_isomorphic(G, H)
138
139 def test_degree_distribution(self):
140 for n in range(1, 10):
141 G = nx.hypercube_graph(n)
142 expected_histogram = [0] * n + [2 ** n]
143 assert nx.degree_histogram(G) == expected_histogram
144
145
146 class TestTriangularLatticeGraph:
147 "Tests for :func:`networkx.generators.lattice.triangular_lattice_graph`"
148
149 def test_lattice_points(self):
150 """Tests that the graph is really a triangular lattice."""
151 for m, n in [(2, 3), (2, 2), (2, 1), (3, 3), (3, 2), (3, 4)]:
152 G = nx.triangular_lattice_graph(m, n)
153 N = (n + 1) // 2
154 assert len(G) == (m + 1) * (1 + N) - (n % 2) * ((m + 1) // 2)
155 for (i, j) in G.nodes():
156 nbrs = G[(i, j)]
157 if i < N:
158 assert (i + 1, j) in nbrs
159 if j < m:
160 assert (i, j + 1) in nbrs
161 if j < m and (i > 0 or j % 2) and (i < N or (j + 1) % 2):
162 assert (i + 1, j + 1) in nbrs or (i - 1, j + 1) in nbrs
163
164 def test_directed(self):
165 """Tests for creating a directed triangular lattice."""
166 G = nx.triangular_lattice_graph(3, 4, create_using=nx.Graph())
167 H = nx.triangular_lattice_graph(3, 4, create_using=nx.DiGraph())
168 assert H.is_directed()
169 for u, v in H.edges():
170 assert v[1] >= u[1]
171 if v[1] == u[1]:
172 assert v[0] > u[0]
173
174 def test_multigraph(self):
175 """Tests for creating a triangular lattice multigraph."""
176 G = nx.triangular_lattice_graph(3, 4, create_using=nx.Graph())
177 H = nx.triangular_lattice_graph(3, 4, create_using=nx.MultiGraph())
178 assert list(H.edges()) == list(G.edges())
179
180 def test_periodic(self):
181 G = nx.triangular_lattice_graph(4, 6, periodic=True)
182 assert len(G) == 12
183 assert G.size() == 36
184 # all degrees are 6
185 assert len([n for n, d in G.degree() if d != 6]) == 0
186 G = nx.triangular_lattice_graph(5, 7, periodic=True)
187 TLG = nx.triangular_lattice_graph
188 pytest.raises(nx.NetworkXError, TLG, 2, 4, periodic=True)
189 pytest.raises(nx.NetworkXError, TLG, 4, 4, periodic=True)
190 pytest.raises(nx.NetworkXError, TLG, 2, 6, periodic=True)
191
192
193 class TestHexagonalLatticeGraph:
194 "Tests for :func:`networkx.generators.lattice.hexagonal_lattice_graph`"
195
196 def test_lattice_points(self):
197 """Tests that the graph is really a hexagonal lattice."""
198 for m, n in [(4, 5), (4, 4), (4, 3), (3, 2), (3, 3), (3, 5)]:
199 G = nx.hexagonal_lattice_graph(m, n)
200 assert len(G) == 2 * (m + 1) * (n + 1) - 2
201 C_6 = nx.cycle_graph(6)
202 hexagons = [
203 [(0, 0), (0, 1), (0, 2), (1, 0), (1, 1), (1, 2)],
204 [(0, 2), (0, 3), (0, 4), (1, 2), (1, 3), (1, 4)],
205 [(1, 1), (1, 2), (1, 3), (2, 1), (2, 2), (2, 3)],
206 [(2, 0), (2, 1), (2, 2), (3, 0), (3, 1), (3, 2)],
207 [(2, 2), (2, 3), (2, 4), (3, 2), (3, 3), (3, 4)],
208 ]
209 for hexagon in hexagons:
210 assert nx.is_isomorphic(G.subgraph(hexagon), C_6)
211
212 def test_directed(self):
213 """Tests for creating a directed hexagonal lattice."""
214 G = nx.hexagonal_lattice_graph(3, 5, create_using=nx.Graph())
215 H = nx.hexagonal_lattice_graph(3, 5, create_using=nx.DiGraph())
216 assert H.is_directed()
217 pos = nx.get_node_attributes(H, "pos")
218 for u, v in H.edges():
219 assert pos[v][1] >= pos[u][1]
220 if pos[v][1] == pos[u][1]:
221 assert pos[v][0] > pos[u][0]
222
223 def test_multigraph(self):
224 """Tests for creating a hexagonal lattice multigraph."""
225 G = nx.hexagonal_lattice_graph(3, 5, create_using=nx.Graph())
226 H = nx.hexagonal_lattice_graph(3, 5, create_using=nx.MultiGraph())
227 assert list(H.edges()) == list(G.edges())
228
229 def test_periodic(self):
230 G = nx.hexagonal_lattice_graph(4, 6, periodic=True)
231 assert len(G) == 48
232 assert G.size() == 72
233 # all degrees are 3
234 assert len([n for n, d in G.degree() if d != 3]) == 0
235 G = nx.hexagonal_lattice_graph(5, 8, periodic=True)
236 HLG = nx.hexagonal_lattice_graph
237 pytest.raises(nx.NetworkXError, HLG, 2, 7, periodic=True)
238 pytest.raises(nx.NetworkXError, HLG, 1, 4, periodic=True)
239 pytest.raises(nx.NetworkXError, HLG, 2, 1, periodic=True)