Mercurial > repos > shellac > sam_consensus_v3
comparison env/lib/python3.9/site-packages/cwltool/tests/wf/iwdr_permutations.cwl @ 0:4f3585e2f14b draft default tip
"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
author | shellac |
---|---|
date | Mon, 22 Mar 2021 18:12:50 +0000 |
parents | |
children |
comparison
equal
deleted
inserted
replaced
-1:000000000000 | 0:4f3585e2f14b |
---|---|
1 #!/usr/bin/env cwl-runner | |
2 class: CommandLineTool | |
3 cwlVersion: v1.2.0-dev4 | |
4 requirements: | |
5 DockerRequirement: | |
6 dockerPull: debian | |
7 InitialWorkDirRequirement: | |
8 listing: | |
9 - entry: $(inputs.first) | |
10 entryname: first_writable_file | |
11 writable: true | |
12 - entry: $(inputs.second) | |
13 entryname: second_read_only_file | |
14 writable: false | |
15 - entry: $(inputs.third) | |
16 entryname: /my_path/third_writable_file | |
17 writable: true | |
18 - entry: $(inputs.fourth) | |
19 entryname: /my_other_path/fourth_read_only_file | |
20 writable: false | |
21 - entry: $(inputs.fifth) | |
22 entryname: fifth_writable_directory | |
23 writable: true | |
24 - entry: $(inputs.sixth) | |
25 entryname: sixth_read_only_directory | |
26 writable: false | |
27 - entry: $(inputs.seventh) | |
28 entryname: /my_path/seventh_writable_directory | |
29 writable: true | |
30 - entry: $(inputs.eighth) | |
31 entryname: /my_other_path/eighth_read_only_directory | |
32 writable: false | |
33 - entry: $(inputs.ninth) | |
34 entryname: nineth_writable_directory_literal | |
35 writable: true | |
36 - entry: $(inputs.tenth) | |
37 entryname: /my_path/tenth_writable_directory_literal | |
38 writable: true | |
39 - entry: baz | |
40 entryname: /my_path/my_file_literal | |
41 inputs: | |
42 first: File | |
43 second: File | |
44 third: File | |
45 fourth: File | |
46 fifth: Directory | |
47 sixth: Directory | |
48 seventh: Directory | |
49 eighth: Directory | |
50 ninth: | |
51 type: Directory | |
52 default: | |
53 class: Directory | |
54 basename: foo | |
55 listing: [] | |
56 tenth: | |
57 type: Directory | |
58 default: | |
59 class: Directory | |
60 basename: bar | |
61 listing: [] | |
62 outputs: | |
63 out: | |
64 type: Directory | |
65 outputBinding: | |
66 glob: . | |
67 baseCommand: [bash, -c] | |
68 arguments: | |
69 - | | |
70 find . | |
71 find /my_path | |
72 find /my_other_path | |
73 echo "a" > first_writable_file | |
74 echo "b" > /my_path/third_writable_file | |
75 touch fifth_writable_directory/c | |
76 touch /my_path/seventh_writable_directory/d |