comparison env/lib/python3.9/site-packages/networkx/algorithms/moral.py @ 0:4f3585e2f14b draft default tip

"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"

0:4f3585e2f14b

r"""Function for computing the moral graph of a directed graph."""

from networkx.utils import not_implemented_for
import itertools

__all__ = ["moral_graph"]


@not_implemented_for("undirected")
def moral_graph(G):
    r"""Return the Moral Graph

        Returns the moralized graph of a given directed graph.

        Parameters
        ----------
        G : NetworkX graph
            Directed graph

        Returns
        -------
        H : NetworkX graph
            The undirected moralized graph of G

        Notes
        ------
        A moral graph is an undirected graph H = (V, E) generated from a
        directed Graph, where if a node has more than one parent node, edges
        between these parent nodes are inserted and all directed edges become
        undirected.

        https://en.wikipedia.org/wiki/Moral_graph

        References
        ----------
        .. [1] Wray L. Buntine. 1995. Chain graphs for learning.
               In Proceedings of the Eleventh conference on Uncertainty
               in artificial intelligence (UAI'95)
    """
    if G is None:
        raise ValueError("Expected NetworkX graph!")

    H = G.to_undirected()
    for preds in G.pred.values():
        predecessors_combinations = itertools.combinations(preds, r=2)
        H.add_edges_from(predecessors_combinations)
    return H