comparison env/lib/python3.9/site-packages/planemo/commands/cmd_dockstore_init.py @ 0:4f3585e2f14b draft default tip

"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"

0:4f3585e2f14b

"""Module describing the planemo ``dockstore_init`` command."""
import os

import click

from planemo import options
from planemo.cli import command_function
from planemo.workflow_lint import DOCKSTORE_REGISTRY_CONF, generate_dockstore_yaml


@click.command('dockstore_init')
@options.optional_project_arg()
@command_function
def cli(ctx, path=".", **kwds):
    """Initialize a .dockstore.yml configuration file for workflows in directory.

    Walk supplied directory and find all Galaxy workflows and test configurations
    and create a ``.dockstore.yml`` with references to these files. Be sure to push
    this file to Github before registering your workflow repository with Dockstore.

    Visit Dockstore at https://dockstore.org/. Find more about registering workflows
    with Dockstore at
    https://docs.dockstore.org/en/develop/getting-started/dockstore-workflows.html.
    """
    # TODO: implement -f semantics
    dockstore_path = os.path.join(path, DOCKSTORE_REGISTRY_CONF)
    contents = generate_dockstore_yaml(path)
    with open(dockstore_path, "w") as f:
        f.write(contents)