Mercurial > repos > shellac > sam_consensus_v3
diff env/lib/python3.9/site-packages/cwltool/tests/wf/mpi_simple_wf.cwl @ 0:4f3585e2f14b draft default tip
"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
author | shellac |
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date | Mon, 22 Mar 2021 18:12:50 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/env/lib/python3.9/site-packages/cwltool/tests/wf/mpi_simple_wf.cwl Mon Mar 22 18:12:50 2021 +0000 @@ -0,0 +1,34 @@ +#!/usr/bin/env cwl-runner + +cwlVersion: v1.1 +class: Workflow +doc: | + Simple 2 step workflow to check that workflow steps are + independently picking up on the number of processes. First run the + parallel get PIDs step (on the input num procs) then run (on a + single proc) the line count. This should equal the input. + +inputs: + processes: + type: int + +steps: + par_pids: + run: mpi_expr.cwl + in: + processes: processes + out: + - pids + + count: + run: mpi_line_count.cwl + in: + pid_file: par_pids/pids + out: + - line_count + +outputs: + line_count: + type: File + outputSource: count/line_count +