Mercurial > repos > shellac > sam_consensus_v3
diff env/lib/python3.9/site-packages/cwltool/tests/wf/revtool.cwl @ 0:4f3585e2f14b draft default tip
"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
author | shellac |
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date | Mon, 22 Mar 2021 18:12:50 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/env/lib/python3.9/site-packages/cwltool/tests/wf/revtool.cwl Mon Mar 22 18:12:50 2021 +0000 @@ -0,0 +1,40 @@ +#!/usr/bin/env cwl-runner +# +# Simplest example command line program wrapper for the Unix tool "rev". +# +class: CommandLineTool +cwlVersion: v1.0 +doc: "Reverse each line using the `rev` command" +$schemas: + - empty.ttl + +# The "inputs" array defines the structure of the input object that describes +# the inputs to the underlying program. Here, there is one input field +# defined that will be called "input" and will contain a "File" object. +# +# The input binding indicates that the input value should be turned into a +# command line argument. In this example inputBinding is an empty object, +# which indicates that the file name should be added to the command line at +# a default location. +inputs: + revtool_input: + type: File + inputBinding: {} + +# The "outputs" array defines the structure of the output object that +# describes the outputs of the underlying program. Here, there is one +# output field defined that will be called "output", must be a "File" type, +# and after the program executes, the output value will be the file +# output.txt in the designated output directory. +outputs: + revtool_output: + type: File + outputBinding: + glob: output.txt + +# The actual program to execute. +baseCommand: rev + +# Specify that the standard output stream must be redirected to a file called +# output.txt in the designated output directory. +stdout: output.txt