diff env/lib/python3.9/site-packages/planemo/runnable_resolve.py @ 0:4f3585e2f14b draft default tip

"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/env/lib/python3.9/site-packages/planemo/runnable_resolve.py	Mon Mar 22 18:12:50 2021 +0000
@@ -0,0 +1,37 @@
+import os
+
+from planemo.galaxy.profiles import translate_alias
+from planemo.galaxy.workflows import GALAXY_WORKFLOWS_PREFIX
+from planemo.tools import uri_to_path
+from .runnable import (
+    for_path,
+    for_uri,
+)
+
+
+def for_runnable_identifier(ctx, runnable_identifier, kwds, temp_path=None, return_all=False):
+    """Convert URI, path, or alias into Runnable."""
+    # could be a URI, path, or alias
+    current_profile = kwds.get('profile')
+    runnable_identifier = translate_alias(ctx, runnable_identifier, current_profile)
+    if not runnable_identifier.startswith(GALAXY_WORKFLOWS_PREFIX):
+        runnable_identifier = uri_to_path(ctx, runnable_identifier)
+    if os.path.exists(runnable_identifier):
+        runnable = for_path(runnable_identifier, temp_path=temp_path, return_all=return_all)
+    else:  # assume galaxy workflow id
+        if not runnable_identifier.startswith(GALAXY_WORKFLOWS_PREFIX):
+            runnable_identifier = f"{GALAXY_WORKFLOWS_PREFIX}{runnable_identifier}"
+        runnable = for_uri(runnable_identifier)
+    return runnable
+
+
+def for_runnable_identifiers(ctx, runnable_identifiers, kwds, temp_path=None):
+    """Convert lists of URIs, paths, and/or aliases into Runnables."""
+    runnables = []
+    for r in runnable_identifiers:
+        runnable = for_runnable_identifier(ctx, r, kwds, temp_path=temp_path, return_all=True)
+        if isinstance(runnable, list):
+            runnables.extend(runnable)
+        else:
+            runnables.append(runnable)
+    return runnables