Mercurial > repos > shellac > sam_consensus_v3
view env/lib/python3.9/site-packages/cwltool/tests/wf/revtool.cwl @ 0:4f3585e2f14b draft default tip
"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
author | shellac |
---|---|
date | Mon, 22 Mar 2021 18:12:50 +0000 |
parents | |
children |
line wrap: on
line source
#!/usr/bin/env cwl-runner # # Simplest example command line program wrapper for the Unix tool "rev". # class: CommandLineTool cwlVersion: v1.0 doc: "Reverse each line using the `rev` command" $schemas: - empty.ttl # The "inputs" array defines the structure of the input object that describes # the inputs to the underlying program. Here, there is one input field # defined that will be called "input" and will contain a "File" object. # # The input binding indicates that the input value should be turned into a # command line argument. In this example inputBinding is an empty object, # which indicates that the file name should be added to the command line at # a default location. inputs: revtool_input: type: File inputBinding: {} # The "outputs" array defines the structure of the output object that # describes the outputs of the underlying program. Here, there is one # output field defined that will be called "output", must be a "File" type, # and after the program executes, the output value will be the file # output.txt in the designated output directory. outputs: revtool_output: type: File outputBinding: glob: output.txt # The actual program to execute. baseCommand: rev # Specify that the standard output stream must be redirected to a file called # output.txt in the designated output directory. stdout: output.txt