view env/lib/python3.9/site-packages/networkx/algorithms/assortativity/tests/test_neighbor_degree.py @ 0:4f3585e2f14b draft default tip

"planemo upload commit 60cee0fc7c0cda8592644e1aad72851dec82c959"
author shellac
date Mon, 22 Mar 2021 18:12:50 +0000
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import networkx as nx
from networkx.testing import almost_equal


class TestAverageNeighbor:
    def test_degree_p4(self):
        G = nx.path_graph(4)
        answer = {0: 2, 1: 1.5, 2: 1.5, 3: 2}
        nd = nx.average_neighbor_degree(G)
        assert nd == answer

        D = G.to_directed()
        nd = nx.average_neighbor_degree(D)
        assert nd == answer

        D = G.to_directed()
        nd = nx.average_neighbor_degree(D)
        assert nd == answer

        D = G.to_directed()
        nd = nx.average_neighbor_degree(D, source="in", target="in")
        assert nd == answer

    def test_degree_p4_weighted(self):
        G = nx.path_graph(4)
        G[1][2]["weight"] = 4
        answer = {0: 2, 1: 1.8, 2: 1.8, 3: 2}
        nd = nx.average_neighbor_degree(G, weight="weight")
        assert nd == answer

        D = G.to_directed()
        nd = nx.average_neighbor_degree(D, weight="weight")
        assert nd == answer

        D = G.to_directed()
        nd = nx.average_neighbor_degree(D, weight="weight")
        assert nd == answer
        nd = nx.average_neighbor_degree(D, source="out", target="out", weight="weight")
        assert nd == answer

        D = G.to_directed()
        nd = nx.average_neighbor_degree(D, source="in", target="in", weight="weight")
        assert nd == answer

    def test_degree_k4(self):
        G = nx.complete_graph(4)
        answer = {0: 3, 1: 3, 2: 3, 3: 3}
        nd = nx.average_neighbor_degree(G)
        assert nd == answer

        D = G.to_directed()
        nd = nx.average_neighbor_degree(D)
        assert nd == answer

        D = G.to_directed()
        nd = nx.average_neighbor_degree(D)
        assert nd == answer

        D = G.to_directed()
        nd = nx.average_neighbor_degree(D, source="in", target="in")
        assert nd == answer

    def test_degree_k4_nodes(self):
        G = nx.complete_graph(4)
        answer = {1: 3.0, 2: 3.0}
        nd = nx.average_neighbor_degree(G, nodes=[1, 2])
        assert nd == answer

    def test_degree_barrat(self):
        G = nx.star_graph(5)
        G.add_edges_from([(5, 6), (5, 7), (5, 8), (5, 9)])
        G[0][5]["weight"] = 5
        nd = nx.average_neighbor_degree(G)[5]
        assert nd == 1.8
        nd = nx.average_neighbor_degree(G, weight="weight")[5]
        assert almost_equal(nd, 3.222222, places=5)