## Mercurial > repos > shellac > sam_consensus_v3

### view env/lib/python3.9/site-packages/networkx/algorithms/traversal/edgedfs.py @ 0:4f3585e2f14b draft default tip

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author | shellac |
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date | Mon, 22 Mar 2021 18:12:50 +0000 |

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""" =========================== Depth First Search on Edges =========================== Algorithms for a depth-first traversal of edges in a graph. """ import networkx as nx FORWARD = "forward" REVERSE = "reverse" __all__ = ["edge_dfs"] def edge_dfs(G, source=None, orientation=None): """A directed, depth-first-search of edges in `G`, beginning at `source`. Yield the edges of G in a depth-first-search order continuing until all edges are generated. Parameters ---------- G : graph A directed/undirected graph/multigraph. source : node, list of nodes The node from which the traversal begins. If None, then a source is chosen arbitrarily and repeatedly until all edges from each node in the graph are searched. orientation : None | 'original' | 'reverse' | 'ignore' (default: None) For directed graphs and directed multigraphs, edge traversals need not respect the original orientation of the edges. When set to 'reverse' every edge is traversed in the reverse direction. When set to 'ignore', every edge is treated as undirected. When set to 'original', every edge is treated as directed. In all three cases, the yielded edge tuples add a last entry to indicate the direction in which that edge was traversed. If orientation is None, the yielded edge has no direction indicated. The direction is respected, but not reported. Yields ------ edge : directed edge A directed edge indicating the path taken by the depth-first traversal. For graphs, `edge` is of the form `(u, v)` where `u` and `v` are the tail and head of the edge as determined by the traversal. For multigraphs, `edge` is of the form `(u, v, key)`, where `key` is the key of the edge. When the graph is directed, then `u` and `v` are always in the order of the actual directed edge. If orientation is not None then the edge tuple is extended to include the direction of traversal ('forward' or 'reverse') on that edge. Examples -------- >>> nodes = [0, 1, 2, 3] >>> edges = [(0, 1), (1, 0), (1, 0), (2, 1), (3, 1)] >>> list(nx.edge_dfs(nx.Graph(edges), nodes)) [(0, 1), (1, 2), (1, 3)] >>> list(nx.edge_dfs(nx.DiGraph(edges), nodes)) [(0, 1), (1, 0), (2, 1), (3, 1)] >>> list(nx.edge_dfs(nx.MultiGraph(edges), nodes)) [(0, 1, 0), (1, 0, 1), (0, 1, 2), (1, 2, 0), (1, 3, 0)] >>> list(nx.edge_dfs(nx.MultiDiGraph(edges), nodes)) [(0, 1, 0), (1, 0, 0), (1, 0, 1), (2, 1, 0), (3, 1, 0)] >>> list(nx.edge_dfs(nx.DiGraph(edges), nodes, orientation="ignore")) [(0, 1, 'forward'), (1, 0, 'forward'), (2, 1, 'reverse'), (3, 1, 'reverse')] >>> list(nx.edge_dfs(nx.MultiDiGraph(edges), nodes, orientation="ignore")) [(0, 1, 0, 'forward'), (1, 0, 0, 'forward'), (1, 0, 1, 'reverse'), (2, 1, 0, 'reverse'), (3, 1, 0, 'reverse')] Notes ----- The goal of this function is to visit edges. It differs from the more familiar depth-first traversal of nodes, as provided by :func:`networkx.algorithms.traversal.depth_first_search.dfs_edges`, in that it does not stop once every node has been visited. In a directed graph with edges [(0, 1), (1, 2), (2, 1)], the edge (2, 1) would not be visited if not for the functionality provided by this function. See Also -------- dfs_edges """ nodes = list(G.nbunch_iter(source)) if not nodes: return directed = G.is_directed() kwds = {"data": False} if G.is_multigraph() is True: kwds["keys"] = True # set up edge lookup if orientation is None: def edges_from(node): return iter(G.edges(node, **kwds)) elif not directed or orientation == "original": def edges_from(node): for e in G.edges(node, **kwds): yield e + (FORWARD,) elif orientation == "reverse": def edges_from(node): for e in G.in_edges(node, **kwds): yield e + (REVERSE,) elif orientation == "ignore": def edges_from(node): for e in G.edges(node, **kwds): yield e + (FORWARD,) for e in G.in_edges(node, **kwds): yield e + (REVERSE,) else: raise nx.NetworkXError("invalid orientation argument.") # set up formation of edge_id to easily look up if edge already returned if directed: def edge_id(edge): # remove direction indicator return edge[:-1] if orientation is not None else edge else: def edge_id(edge): # single id for undirected requires frozenset on nodes return (frozenset(edge[:2]),) + edge[2:] # Basic setup check_reverse = directed and orientation in ("reverse", "ignore") visited_edges = set() visited_nodes = set() edges = {} # start DFS for start_node in nodes: stack = [start_node] while stack: current_node = stack[-1] if current_node not in visited_nodes: edges[current_node] = edges_from(current_node) visited_nodes.add(current_node) try: edge = next(edges[current_node]) except StopIteration: # No more edges from the current node. stack.pop() else: edgeid = edge_id(edge) if edgeid not in visited_edges: visited_edges.add(edgeid) # Mark the traversed "to" node as to-be-explored. if check_reverse and edge[-1] == REVERSE: stack.append(edge[0]) else: stack.append(edge[1]) yield edge