Mercurial > repos > shians > shrnaseq
comparison hairpinTool.xml @ 9:f1076bfb0ed1
- Fixed tool to actually make use of barcode location options
- Stored variables now properly used in processHairpinReads function
| author | shian_su <registertonysu@gmail.com> |
|---|---|
| date | Wed, 30 Jul 2014 15:13:45 +1000 |
| parents | 548802b3492f |
| children | 8923d4ea858b |
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| 8:548802b3492f | 9:f1076bfb0ed1 |
|---|---|
| 1 <tool id="shRNAseq" name="shRNAseq Tool" version="1.0.9"> | 1 <tool id="shRNAseq" name="shRNAseq Tool" version="1.0.11"> |
| 2 <description> | 2 <description> |
| 3 Analyse hairpin differential representation using edgeR | 3 Analyse hairpin differential representation using edgeR |
| 4 </description> | 4 </description> |
| 5 | 5 |
| 6 <requirements> | 6 <requirements> |
| 7 <requirement type="R-module" version="3.5.27">edgeR</requirement> | 7 <requirement type="R-module" version="3.6.2">edgeR</requirement> |
| 8 <requirement type="R-module" version="3.18.13">limma</requirement> | 8 <requirement type="R-module" version="3.20.7">limma</requirement> |
| 9 <requirement type="package" version="3.0.3">R_3_0_3</requirement> | |
| 9 </requirements> | 10 </requirements> |
| 10 | 11 |
| 11 <stdio> | 12 <stdio> |
| 12 <exit_code range="1:" level="fatal" description="Tool exception" /> | 13 <exit_code range="1:" level="fatal" description="Tool exception" /> |
| 13 </stdio> | 14 </stdio> |