# HG changeset patch
# User shian_su <registertonysu@gmail.com>
# Date 1418701294 -39600
# Node ID b2fe55fd0651b89ca237e0eff2bce12b3a820ab8
# Parent  7a80e9ec63cbd2315c0ddff953c07048e524ad06
- Initial commit

diff -r 7a80e9ec63cb -r b2fe55fd0651 diffexp.R
--- a/diffexp.R	Tue Dec 16 14:38:15 2014 +1100
+++ b/diffexp.R	Tue Dec 16 14:41:34 2014 +1100
@@ -620,7 +620,7 @@
 ListItem(cit[7])
 cata("</ol>\n")
 
-cata("<p>Report problems to: su.s@wehi.edu.au</p>\n")
+cata("<p>Please report problems or suggestions to: su.s@wehi.edu.au</p>\n")
 
 for (i in 1:nrow(linkData)) {
   if (grepl("session_info", linkData$Link[i])) {
@@ -641,4 +641,4 @@
 cata("</table>\n")
 
 cata("</body>\n")
-cata("</html>")
\ No newline at end of file
+cata("</html>")
diff -r 7a80e9ec63cb -r b2fe55fd0651 diffexp.xml
--- a/diffexp.xml	Tue Dec 16 14:38:15 2014 +1100
+++ b/diffexp.xml	Tue Dec 16 14:41:34 2014 +1100
@@ -340,6 +340,10 @@
     precision weights unlock linear model analysis tools for
     RNA-seq read counts. Genome Biology 15, R29.
 
+  * Ritchie, M. E., Diyagama, D., Neilson, J., van Laar, R., Dobrovic, 
+    A., Holloway, A., and Smyth, G. K. (2006). Empirical array quality weights
+    for microarray data. BMC Bioinformatics 7, Article 261.
+
 .. class:: infomark
 
 edgeR
@@ -363,7 +367,7 @@
 	  of multifactor RNA-Seq experiments with respect to biological variation. 
 	  Nucleic Acids Research 40, 4288-4297
 	  
-Report problems to: su.s@wehi.edu.au
+Please report problems or suggestions to: su.s@wehi.edu.au
 
 .. _edgeR: http://www.bioconductor.org/packages/release/bioc/html/edgeR.html
 .. _limma: http://www.bioconductor.org/packages/release/bioc/html/limma.html