# HG changeset patch
# User si-datascience
# Date 1544466470 18000
# Node ID 86edfc3455d59040e490a6bd7230eb2ffe86eaec

Uploaded

diff -r 000000000000 -r 86edfc3455d5 tool_dependencies.xml
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Mon Dec 10 13:27:50 2018 -0500
@@ -0,0 +1,53 @@
+ <tool_dependency>
+    <package name="bzlib" version="1.0.6">
+        <install version="1.0">
+            <actions_group>
+                <actions os="linux" architecture="x86_64">
+                    <!-- first action is always downloading -->
+                    <action type="download_by_url">https://phoenixnap.dl.sourceforge.net/project/bzip2/bzip2-1.0.6.tar.gz</action>
+                    <action type="shell_command">
+                        <![CDATA[
+                            make -f Makefile-libbz2_so &&
+                            make &&
+                            make install PREFIX=$INSTALL_DIR/bzlib &&
+                            cp bzip2-shared $INSTALL_DIR/bzlib/bin/bzip2 &&
+                            cp -a libbz2.so* $INSTALL_DIR/bzlib/lib &&
+                            ln -s libbz2.so.1.0 $INSTALL_DIR/bzlib/lib/libbz2.so
+                        ]]>
+                    </action>
+                    <action type="move_directory_files">
+                        <source_directory>./</source_directory>
+                        <destination_directory>$INSTALL_DIR/bzlib/source</destination_directory>
+                    </action>
+                </actions>
+                <actions>
+                    <!-- This actions tag is processed for all platforms besides Linux x86_64. -->
+                    <action type="download_by_url">http://www.bzip.org/1.0.6/bzip2-1.0.6.tar.gz</action>
+                    <action type="shell_command">
+                        <![CDATA[
+                            make &&
+                            make install PREFIX=$INSTALL_DIR/bzlib
+                        ]]>
+                    </action>
+                     <action type="move_directory_files">
+                        <source_directory>./</source_directory>
+                        <destination_directory>$INSTALL_DIR/bzlib/source</destination_directory>
+                    </action>
+                </actions>
+                <action type="set_environment">
+                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bzlib/bin</environment_variable>
+                    <environment_variable name="BZLIB_LIB_DIR" action="set_to">$INSTALL_DIR/bzlib/lib</environment_variable>
+                    <environment_variable name="BZLIB_INCLUDE_DIR" action="set_to">$INSTALL_DIR/bzlib/include</environment_variable>
+                    <environment_variable name="BZLIB_SOURCE_DIR" action="set_to">$INSTALL_DIR/bzlib/source</environment_variable>
+                    <environment_variable name="LD_LIBRARY_PATH" action="prepend_to">$INSTALL_DIR/bzlib/lib</environment_variable>
+                    <environment_variable name="LD_LIBRARY_PATH" action="prepend_to">$INSTALL_DIR/bzlib/source</environment_variable>
+                    <environment_variable name="LIBRARY_PATH" action="prepend_to">$INSTALL_DIR/bzlib/lib</environment_variable>
+                    <environment_variable name="LIBRARY_PATH" action="prepend_to">$INSTALL_DIR/bzlib/source</environment_variable>
+                    <environment_variable name="CPLUS_INCLUDE_PATH" action="prepend_to">$INSTALL_DIR/bzlib/include</environment_variable>
+                    <environment_variable name="C_INCLUDE_PATH" action="prepend_to">$INSTALL_DIR/bzlib/include</environment_variable>
+                </action>
+            </actions_group>
+        </install>
+        <readme>Compiling bzlib requires make and a C compiler. You can access bzlib with $BZLIB_LIB_DIR and $BZLIB_INCLUDE_DIR.</readme>
+    </package>
+</tool_dependency>