Mercurial > repos > sigven > metascreen_pre_experimental
comparison metascreen.xml @ 4:22251a4b8f8f draft
Uploaded
author | sigven |
---|---|
date | Fri, 11 Nov 2022 14:49:08 +0000 |
parents | 2315c8ea7d2f |
children | e9fcb14b0065 |
comparison
equal
deleted
inserted
replaced
3:2315c8ea7d2f | 4:22251a4b8f8f |
---|---|
1 <tool id="metascreenPre" name="mscreen: pre-experimental" version="0.2.1"> | 1 <tool id="metascreenPre" name="mscreen: pre-experimental" version="0.2.2"> |
2 <description>Pre-experimental setup of drug combination screens</description> | 2 <description>Pre-experimental setup of drug combination screens</description> |
3 <requirements> | 3 <requirements> |
4 <container type="docker">sigven/metascreen:0.2.0</container> | 4 <container type="docker">sigven/metascreen:0.2.0</container> |
5 </requirements> | 5 </requirements> |
6 <command detect_errors="aggressive"><![CDATA[ | 6 <command detect_errors="aggressive"><![CDATA[ |
77 sourcePlate = dplyr::bind_rows( | 77 sourcePlate = dplyr::bind_rows( |
78 sourcePlate, | 78 sourcePlate, |
79 metascreen::importPlateMap( | 79 metascreen::importPlateMap( |
80 "$pmap.element_identifier", | 80 "$pmap.element_identifier", |
81 .fileFormat = "PlateMap", | 81 .fileFormat = "PlateMap", |
82 galaxy = TRUE, | |
83 .sourcePlateConv = $input_data.convert_platemap_format | 82 .sourcePlateConv = $input_data.convert_platemap_format |
84 ) | 83 ) |
85 ); | 84 ); |
86 #end for | 85 #end for |
87 | 86 |