Mercurial > repos > simon-gladman > snippy
comparison snippy.xml @ 5:ff31f16f5dfd draft
Added genbank support
| author | simon-gladman |
|---|---|
| date | Tue, 07 Jun 2016 03:41:47 -0400 |
| parents | f0b139f53e1f |
| children | 15f5a3074012 |
comparison
equal
deleted
inserted
replaced
| 4:f0b139f53e1f | 5:ff31f16f5dfd |
|---|---|
| 127 </data> | 127 </data> |
| 128 </outputs> | 128 </outputs> |
| 129 | 129 |
| 130 <tests> | 130 <tests> |
| 131 <test> | 131 <test> |
| 132 <param name="ref_type_selector" value="fasta" /> | |
| 132 <param name="ref" value="Ecoli.fna" ftype="fasta" /> | 133 <param name="ref" value="Ecoli.fna" ftype="fasta" /> |
| 133 <param name="fastq_input_selector" value="paired" /> | 134 <param name="fastq_input_selector" value="paired" /> |
| 134 <param name="fastq_input1" ftype="fastq" value="reads_1.fq" /> | 135 <param name="fastq_input1" ftype="fastq" value="reads_1.fq" /> |
| 135 <param name="fastq_input2" ftype="fastq" value="reads_2.fq" /> | 136 <param name="fastq_input2" ftype="fastq" value="reads_2.fq" /> |
| 136 <output name="snpsum" ftype="tabular" file="test/snps.txt" lines-diff="5" /> | 137 <output name="snpsum" ftype="tabular" file="test/snps.txt" lines-diff="5" /> |