Mercurial > repos > simon-gladman > velvetoptimiser

comparison velvetoptimiser.xml @ 3:37d88f41c810 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/velvetoptimiser commit a4b0969b33a68a0ea9ba12291f6694aec24f13ed
author iuc
date Tue, 30 Oct 2018 20:29:42 -0400
parents 0e2b4e3f9ca1
children 4a53b89fa703
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2:0e2b4e3f9ca1 3:37d88f41c810
1 <tool id="velvetoptimiser" name="VelvetOptimiser" version="2.2.5"> 1 <tool id="velvetoptimiser" name="VelvetOptimiser" version="2.2.6">
2 <description>Automatically optimize Velvet assemblies</description> 2 <description>Automatically optimize Velvet assemblies</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="5.22.0">perl</requirement>
5 <requirement type="package" version="1.2.10">velvet</requirement> 4 <requirement type="package" version="1.2.10">velvet</requirement>
6 <requirement type="package" version="2.2.5">perl-velvetoptimiser</requirement> 5 <requirement type="package" version="2.2.6">perl-velvetoptimiser</requirement>
7 </requirements> 6 </requirements>
8 <version_command>VelvetOptimiser.pl --version</version_command> 7 <version_command>VelvetOptimiser.pl --version</version_command>
9 <command detect_errors="exit_code"><![CDATA[ 8 <command detect_errors="exit_code"><![CDATA[
10 export OMP_NUM_THREADS=2 && 9 export OMP_NUM_THREADS=2 &&
11 export OMP_THREAD_LIMIT=2 && 10 export OMP_THREAD_LIMIT=2 &&