Mercurial > repos > stemcellcommons > kallisto_rnaseq_workflows
comparison Kallisto_RNA-seq_(PE)_Quantification_-_Zebrafish.ga @ 1:cbf8233bf744 draft default tip
planemo upload commit dc4a5924dc98d22c14eac246506d13dfc13c3c6d
author | scottx611x |
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date | Tue, 04 Sep 2018 15:12:04 -0400 |
parents | ce9f11c6b94b |
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0:ce9f11c6b94b | 1:cbf8233bf744 |
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1 { | 1 { |
2 "a_galaxy_workflow": "true", | 2 "a_galaxy_workflow": "true", |
3 "annotation": "{\n \"description\": \"Rapid transcript quantification via pseudoalignment (https://pachterlab.github.io/kallisto/). Paired-end reads are quantified against the danRer11 transcriptome.\",\n \"file_relationship\": {\n \"value_type\": \"LIST\",\n \"name\": \"List of Read Pairs\",\n \"file_relationship\": {\n \"file_relationship\": {},\n \"value_type\": \"PAIR\",\n \"name\": \"Read Pair\",\n \"input_files\": [{\n \"allowed_filetypes\": [{\"name\": \"FASTQ\"}],\n \"name\": \"Input File\",\n \"description\": \"Forward Reads\"\n },\n {\n \"allowed_filetypes\": [{\"name\": \"FASTQ\"}],\n \"name\": \"Input File\",\n \"description\": \"Reverse Reads\"\n }\n ]\n }\n }\n}", | 3 "annotation": "{\n \"description\": \"Rapid transcript quantification via pseudoalignment (https://pachterlab.github.io/kallisto/). Paired-end reads are quantified against the danRer11 transcriptome.\",\n \"file_relationship\": {\n \"value_type\": \"LIST\",\n \"name\": \"List of Read Pairs\",\n \"file_relationship\": {\n \"file_relationship\": {},\n \"value_type\": \"PAIR\",\n \"name\": \"Read Pair\",\n \"input_files\": [{\n \"allowed_filetypes\": [{\"name\": \"FASTQ\"}],\n \"name\": \"Input File\",\n \"description\": \"Forward Reads\"\n },\n {\n \"allowed_filetypes\": [{\"name\": \"FASTQ\"}],\n \"name\": \"Input File\",\n \"description\": \"Reverse Reads\"\n }\n ]\n }\n }\n}", |
4 "format-version": "0.1", | 4 "format-version": "0.1", |
5 "name": "Kallisto RNA-seq (PE) Quantification - Human", | 5 "name": "Kallisto RNA-seq (PE) Quantification - Zebrafish", |
6 "steps": { | 6 "steps": { |
7 "0": { | 7 "0": { |
8 "annotation": "", | 8 "annotation": "", |
9 "content_id": null, | 9 "content_id": null, |
10 "errors": null, | 10 "errors": null, |