diff Kallisto_RNA-seq_(SE)_Quantification_-_Human.ga @ 0:ce9f11c6b94b draft

planemo upload commit 96bf4e03fcbbbc1eb0e4b5af12c7da8aa4477fa8
author scottx611x
date Tue, 04 Sep 2018 13:56:11 -0400
parents
children
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/Kallisto_RNA-seq_(SE)_Quantification_-_Human.ga	Tue Sep 04 13:56:11 2018 -0400
@@ -0,0 +1,113 @@
+{
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+    "annotation": "{ \n    \"description\": \"Rapid transcript quantification via pseudoalignment (https://pachterlab.github.io/kallisto/). Single-end reads are quantified against the hg38 transcriptome.\", \n    \"file_relationship\": { \n        \"file_relationship\": {}, \n        \"value_type\": \"LIST\", \n        \"name\": \"List of FASTQ Files\", \n        \"input_files\": [ \n            { \n                \"allowed_filetypes\": [{\"name\": \"FASTQ\"}], \n                \"name\": \"Input File\", \n                \"description\": \"FASTQ File\" \n            } \n        ] \n    } \n}", 
+    "format-version": "0.1", 
+    "name": "Kallisto RNA-seq (SE) Quantification - Human", 
+    "steps": {
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+            "annotation": "", 
+            "content_id": null, 
+            "errors": null, 
+            "id": 0, 
+            "input_connections": {}, 
+            "inputs": [], 
+            "label": null, 
+            "name": "Input dataset collection", 
+            "outputs": [], 
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+            "tool_state": "{\"collection_type\": \"list\"}", 
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+            "errors": null, 
+            "id": 1, 
+            "input_connections": {
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+            "inputs": [
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+            ], 
+            "label": null, 
+            "name": "Kallisto quant", 
+            "outputs": [
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+                    "type": "h5"
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+                }, 
+                "HideDatasetActionfusion_output": {
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+                    "action_type": "HideDatasetAction", 
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+            "tool_shed_repository": {
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+                "owner": "iuc", 
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+}
\ No newline at end of file