Mercurial > repos > stemcellcommons > spp_tool

diff run_spp.R @ 1:23b22c1692fa draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Replace simplejson with json.
author hackdna
date Tue, 20 May 2014 10:53:35 -0400
parents b15734276ca3
children
line wrap: on
line diff
--- a/run_spp.R	Thu Oct 17 12:39:45 2013 -0400
+++ b/run_spp.R	Tue May 20 10:53:35 2014 -0400
@@ -120,7 +120,7 @@
 	sep.peak <- NA # user-defined peak shift
 	exclude.min <- 10 # lowerbound of strand shift exclusion region
 	exclude.max <- NaN # upperbound of strand shift exclusion region
-	n.nodes <- NA # number of parallel processing nodes
+	n.nodes <- 32 # number of parallel processing nodes
 	fdr <- 0.01 # false discovery rate threshold for peak calling
 	npeak <- NA # threshold on number of peaks to call
 	temp.dir <- tempdir() # temporary directory