Mercurial > repos > stemcellcommons > spp_tool
diff spp_wrapper.py @ 1:23b22c1692fa draft default tip
Replace simplejson with json.
author | hackdna |
---|---|
date | Tue, 20 May 2014 10:53:35 -0400 |
parents | b15734276ca3 |
children |
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--- a/spp_wrapper.py Thu Oct 17 12:39:45 2013 -0400 +++ b/spp_wrapper.py Tue May 20 10:53:35 2014 -0400 @@ -5,14 +5,12 @@ import sys, subprocess, tempfile, shutil, glob, os, os.path, gzip from galaxy import eggs -import pkg_resources -pkg_resources.require( "simplejson" ) -import simplejson +import json CHUNK_SIZE = 1024 def main(): - options = simplejson.load( open( sys.argv[1] ) ) + options = json.load( open( sys.argv[1] ) ) output_narrow_peak = sys.argv[2] output_region_peak = sys.argv[3] output_peakshift_file = sys.argv[4] @@ -99,4 +97,4 @@ os.unlink( stderr_name ) #os.rmdir( tmp_dir ) -if __name__ == "__main__": main() \ No newline at end of file +if __name__ == "__main__": main()