comparison taxonomyStructure.sql @ 0:4ecb2ce50254 draft default tip

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author stheil
date Mon, 26 Oct 2015 10:59:07 -0400
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1 -- MySQL dump 10.13 Distrib 5.5.31, for debian-linux-gnu (x86_64)
2 --
3 -- Host: localhost Database: taxonomy
4 -- ------------------------------------------------------
5 -- Server version 5.5.31-0ubuntu0.12.04.2
6
7 /*!40101 SET @OLD_CHARACTER_SET_CLIENT=@@CHARACTER_SET_CLIENT */;
8 /*!40101 SET @OLD_CHARACTER_SET_RESULTS=@@CHARACTER_SET_RESULTS */;
9 /*!40101 SET @OLD_COLLATION_CONNECTION=@@COLLATION_CONNECTION */;
10 /*!40101 SET NAMES utf8 */;
11 /*!40103 SET @OLD_TIME_ZONE=@@TIME_ZONE */;
12 /*!40103 SET TIME_ZONE='+00:00' */;
13 /*!40014 SET @OLD_UNIQUE_CHECKS=@@UNIQUE_CHECKS, UNIQUE_CHECKS=0 */;
14 /*!40014 SET @OLD_FOREIGN_KEY_CHECKS=@@FOREIGN_KEY_CHECKS, FOREIGN_KEY_CHECKS=0 */;
15 /*!40101 SET @OLD_SQL_MODE=@@SQL_MODE, SQL_MODE='NO_AUTO_VALUE_ON_ZERO' */;
16 /*!40111 SET @OLD_SQL_NOTES=@@SQL_NOTES, SQL_NOTES=0 */;
17
18 --
19 -- Table structure for table `gi_taxid_nucl`
20 --
21 PRAGMA encoding = "UTF-8";
22 PRAGMA default_synchronous = OFF;
23 CREATE TABLE `gi_taxid_nucl` (
24 `gi` double NOT NULL,
25 `tax_id` double NOT NULL,
26 PRIMARY KEY (`gi`)
27 ) ;
28 /*!40101 SET character_set_client = @saved_cs_client */;
29
30 --
31 -- Table structure for table `gi_taxid_prot`
32 --
33
34
35 CREATE TABLE `gi_taxid_prot` (
36 `gi` double NOT NULL,
37 `tax_id` double NOT NULL,
38 PRIMARY KEY (`gi`)
39 ) ;
40 /*!40101 SET character_set_client = @saved_cs_client */;
41
42 --
43 -- Table structure for table `names`
44 --
45
46
47 CREATE TABLE `names` (
48 `tax_id` int unsigned NOT NULL DEFAULT '0',
49 `name_txt` varchar(255) NOT NULL DEFAULT '',
50 `unique_name` varchar(255) DEFAULT NULL,
51 `name_class` varchar(32) NOT NULL DEFAULT ''
52 ) ;
53 /*!40101 SET character_set_client = @saved_cs_client */;
54
55
56 --
57 -- Table structure for table `nodes`
58 --
59
60
61 CREATE TABLE `nodes` (
62 `tax_id` int unsigned NOT NULL DEFAULT '0',
63 `parent_tax_id` int unsigned NOT NULL DEFAULT '0',
64 `rank` varchar(32) DEFAULT NULL,
65 `embl_code` varchar(16) DEFAULT NULL,
66 `division_id` int NOT NULL DEFAULT '0',
67 `inherited_div_flag` int NOT NULL DEFAULT '0',
68 `genetic_code_id` int NOT NULL DEFAULT '0',
69 `inherited_GC_flag` int NOT NULL DEFAULT '0',
70 `mitochondrial_genetic_code_id` int NOT NULL DEFAULT '0',
71 `inherited_MGC_flag` int NOT NULL DEFAULT '0',
72 `GenBank_hidden_flag` int NOT NULL DEFAULT '0',
73 `hidden_subtree_root_flag` int NOT NULL DEFAULT '0',
74 `comments` varchar(255) DEFAULT NULL,
75 PRIMARY KEY (`tax_id`)
76 ) ;
77
78
79 /*!40101 SET character_set_client = @saved_cs_client */;
80 /*!40103 SET TIME_ZONE=@OLD_TIME_ZONE */;
81
82 /*!40101 SET SQL_MODE=@OLD_SQL_MODE */;
83 /*!40014 SET FOREIGN_KEY_CHECKS=@OLD_FOREIGN_KEY_CHECKS */;
84 /*!40014 SET UNIQUE_CHECKS=@OLD_UNIQUE_CHECKS */;
85 /*!40101 SET CHARACTER_SET_CLIENT=@OLD_CHARACTER_SET_CLIENT */;
86 /*!40101 SET CHARACTER_SET_RESULTS=@OLD_CHARACTER_SET_RESULTS */;
87 /*!40101 SET COLLATION_CONNECTION=@OLD_COLLATION_CONNECTION */;
88 /*!40111 SET SQL_NOTES=@OLD_SQL_NOTES */;
89
90 -- Dump completed on 2013-07-02 10:17:11