diff taxonomyStructure.sql @ 0:4ecb2ce50254 draft default tip

Uploaded
author stheil
date Mon, 26 Oct 2015 10:59:07 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/taxonomyStructure.sql	Mon Oct 26 10:59:07 2015 -0400
@@ -0,0 +1,90 @@
+-- MySQL dump 10.13  Distrib 5.5.31, for debian-linux-gnu (x86_64)
+--
+-- Host: localhost    Database: taxonomy
+-- ------------------------------------------------------
+-- Server version	5.5.31-0ubuntu0.12.04.2
+
+/*!40101 SET @OLD_CHARACTER_SET_CLIENT=@@CHARACTER_SET_CLIENT */;
+/*!40101 SET @OLD_CHARACTER_SET_RESULTS=@@CHARACTER_SET_RESULTS */;
+/*!40101 SET @OLD_COLLATION_CONNECTION=@@COLLATION_CONNECTION */;
+/*!40101 SET NAMES utf8 */;
+/*!40103 SET @OLD_TIME_ZONE=@@TIME_ZONE */;
+/*!40103 SET TIME_ZONE='+00:00' */;
+/*!40014 SET @OLD_UNIQUE_CHECKS=@@UNIQUE_CHECKS, UNIQUE_CHECKS=0 */;
+/*!40014 SET @OLD_FOREIGN_KEY_CHECKS=@@FOREIGN_KEY_CHECKS, FOREIGN_KEY_CHECKS=0 */;
+/*!40101 SET @OLD_SQL_MODE=@@SQL_MODE, SQL_MODE='NO_AUTO_VALUE_ON_ZERO' */;
+/*!40111 SET @OLD_SQL_NOTES=@@SQL_NOTES, SQL_NOTES=0 */;
+
+--
+-- Table structure for table `gi_taxid_nucl`
+--
+PRAGMA encoding = "UTF-8";
+PRAGMA default_synchronous = OFF;
+CREATE TABLE `gi_taxid_nucl` (
+  `gi` double NOT NULL,
+  `tax_id` double NOT NULL,
+  PRIMARY KEY (`gi`)
+) ;
+/*!40101 SET character_set_client = @saved_cs_client */;
+
+--
+-- Table structure for table `gi_taxid_prot`
+--
+
+
+CREATE TABLE `gi_taxid_prot` (
+  `gi` double NOT NULL,
+  `tax_id` double NOT NULL,
+  PRIMARY KEY (`gi`)
+) ;
+/*!40101 SET character_set_client = @saved_cs_client */;
+
+--
+-- Table structure for table `names`
+--
+
+
+CREATE TABLE `names` (
+  `tax_id` int unsigned NOT NULL DEFAULT '0',
+  `name_txt` varchar(255) NOT NULL DEFAULT '',
+  `unique_name` varchar(255) DEFAULT NULL,
+  `name_class` varchar(32) NOT NULL DEFAULT ''
+) ;
+/*!40101 SET character_set_client = @saved_cs_client */;
+
+
+--
+-- Table structure for table `nodes`
+--
+
+
+CREATE TABLE `nodes` (
+  `tax_id` int unsigned NOT NULL DEFAULT '0',
+  `parent_tax_id` int unsigned NOT NULL DEFAULT '0',
+  `rank` varchar(32) DEFAULT NULL,
+  `embl_code` varchar(16) DEFAULT NULL,
+  `division_id` int NOT NULL DEFAULT '0',
+  `inherited_div_flag` int NOT NULL DEFAULT '0',
+  `genetic_code_id` int NOT NULL DEFAULT '0',
+  `inherited_GC_flag` int NOT NULL DEFAULT '0',
+  `mitochondrial_genetic_code_id` int NOT NULL DEFAULT '0',
+  `inherited_MGC_flag` int NOT NULL DEFAULT '0',
+  `GenBank_hidden_flag` int NOT NULL DEFAULT '0',
+  `hidden_subtree_root_flag` int NOT NULL DEFAULT '0',
+  `comments` varchar(255) DEFAULT NULL,
+  PRIMARY KEY (`tax_id`)
+) ;
+
+
+/*!40101 SET character_set_client = @saved_cs_client */;
+/*!40103 SET TIME_ZONE=@OLD_TIME_ZONE */;
+
+/*!40101 SET SQL_MODE=@OLD_SQL_MODE */;
+/*!40014 SET FOREIGN_KEY_CHECKS=@OLD_FOREIGN_KEY_CHECKS */;
+/*!40014 SET UNIQUE_CHECKS=@OLD_UNIQUE_CHECKS */;
+/*!40101 SET CHARACTER_SET_CLIENT=@OLD_CHARACTER_SET_CLIENT */;
+/*!40101 SET CHARACTER_SET_RESULTS=@OLD_CHARACTER_SET_RESULTS */;
+/*!40101 SET COLLATION_CONNECTION=@OLD_COLLATION_CONNECTION */;
+/*!40111 SET SQL_NOTES=@OLD_SQL_NOTES */;
+
+-- Dump completed on 2013-07-02 10:17:11