# HG changeset patch # User takakoron # Date 1460387985 14400 # Node ID bed66843c66a341e5ab5690c0b3a469b5c327a4c # Parent 0d895b0e0f15bdf7c6dff942c593edafa48ec158 planemo upload diff -r 0d895b0e0f15 -r bed66843c66a snpEff_genomes.loc --- a/snpEff_genomes.loc Mon Apr 11 11:16:50 2016 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,21 +0,0 @@ -# SnpEff databases -# List created using command: java -jar snpEff.jar databases -# Version Description -DNApod_RAPbuild5_representative DNApod_Rice_IRGSP-RAP_build5_representative -DNApod_RAPbuild5_predicted DNApod_Rice_IRGSP-RAP_build5_predicted -DNApod_maizeZmB73_5b_WGS DNApod_Maize_ZmB73_5b_working-set -DNApod_maizeZmB73_5b_FGS DNApod_Maize_ZmB73_5b_filtered-set -DNApod_Sorbi_Sbi1.4_JGI DNApod_Sorbi_Sbi1.4_JGI -alyrata1 Arabidopsis_lyrata alyrata1 -alyrata107 Arabidopsis_lyrata alyrata107 -v.1.0.21 Arabidopsis_lyrata v.1.0.21 -athaliana130 Arabidopsis_Thaliana athaliana130 -athalianaTair10 Arabidopsis_Thaliana athalianaTair10 -athalianaTair9 Arabidopsis_Thaliana athalianaTair9 -TAIR10.21 Arabidopsis_thaliana TAIR10.21 -Oryza_brachyantha.v1.4b.21 Oryza_brachyantha Oryza_brachyantha.v1.4b.21 -AGI1.1.21 Oryza_glaberrima AGI1.1.21 -ASM465v1.21 Oryza_indica ASM465v1.21 -IRGSP-1.0.21 Oryza_sativa IRGSP-1.0.21 -Sorbi1.21 Sorghum_bicolor Sorbi1.21 -AGPv3.21 Zea_mays AGPv3.21 diff -r 0d895b0e0f15 -r bed66843c66a snpEff_genomes.loc.sample --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/snpEff_genomes.loc.sample Mon Apr 11 11:19:45 2016 -0400 @@ -0,0 +1,21 @@ +# SnpEff databases +# List created using command: java -jar snpEff.jar databases +# Version Description +DNApod_RAPbuild5_representative DNApod_Rice_IRGSP-RAP_build5_representative +DNApod_RAPbuild5_predicted DNApod_Rice_IRGSP-RAP_build5_predicted +DNApod_maizeZmB73_5b_WGS DNApod_Maize_ZmB73_5b_working-set +DNApod_maizeZmB73_5b_FGS DNApod_Maize_ZmB73_5b_filtered-set +DNApod_Sorbi_Sbi1.4_JGI DNApod_Sorbi_Sbi1.4_JGI +alyrata1 Arabidopsis_lyrata alyrata1 +alyrata107 Arabidopsis_lyrata alyrata107 +v.1.0.21 Arabidopsis_lyrata v.1.0.21 +athaliana130 Arabidopsis_Thaliana athaliana130 +athalianaTair10 Arabidopsis_Thaliana athalianaTair10 +athalianaTair9 Arabidopsis_Thaliana athalianaTair9 +TAIR10.21 Arabidopsis_thaliana TAIR10.21 +Oryza_brachyantha.v1.4b.21 Oryza_brachyantha Oryza_brachyantha.v1.4b.21 +AGI1.1.21 Oryza_glaberrima AGI1.1.21 +ASM465v1.21 Oryza_indica ASM465v1.21 +IRGSP-1.0.21 Oryza_sativa IRGSP-1.0.21 +Sorbi1.21 Sorghum_bicolor Sorbi1.21 +AGPv3.21 Zea_mays AGPv3.21