# HG changeset patch
# User tduigou
# Date 1721727052 0
# Node ID e0d146e3010d43bfe52e92c5f93cb9c91776e944
# Parent  645d10db2819f2dc2a20852f49bed4ce429c5cbd
planemo upload for repository ['https://github.com/brsynth/icfree-ml', 'https://github.com/pablocarb/doebase'] commit 20770dfcb79499aa201b8b6faed420babef8d053

diff -r 645d10db2819 -r e0d146e3010d test-data/sampler/input/components.tsv
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/sampler/input/components.tsv	Tue Jul 23 09:30:52 2024 +0000
@@ -0,0 +1,5 @@
+Component	maxValue
+Hela lysate	1000
+Access prot 50%	400
+Reaction mix	400
+RNA 1ug/uL	200
diff -r 645d10db2819 -r e0d146e3010d test-data/sampler/input/parameters.tsv
--- a/test-data/sampler/input/parameters.tsv	Wed Feb 14 15:24:27 2024 +0000
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,9 +0,0 @@
-Component	maxValue	Ratios
-Component_1	125	0.0 0.1 0.3 0.5 1.0
-Component_2	125	1
-Component_3	125
-Component_4	125
-Component_5	125
-Component_6	125
-Component_7	125
-Component_8	125
diff -r 645d10db2819 -r e0d146e3010d test-data/sampler/output/sampling.test-1.tsv
--- a/test-data/sampler/output/sampling.test-1.tsv	Wed Feb 14 15:24:27 2024 +0000
+++ b/test-data/sampler/output/sampling.test-1.tsv	Tue Jul 23 09:30:52 2024 +0000
@@ -1,100 +1,4 @@
-Component_1	Component_2	Component_3	Component_4	Component_5	Component_6	Component_7	Component_8
-0.0	125.0	125.0	0.0	31.25	93.75	62.5	93.75
-37.5	125.0	31.25	93.75	125.0	62.5	125.0	125.0
-37.5	125.0	0.0	93.75	31.25	31.25	31.25	0.0
-37.5	125.0	31.25	62.5	125.0	125.0	93.75	93.75
-12.5	125.0	31.25	31.25	93.75	125.0	31.25	31.25
-125.0	125.0	31.25	93.75	125.0	0.0	125.0	93.75
-0.0	125.0	93.75	0.0	93.75	125.0	31.25	125.0
-125.0	125.0	125.0	31.25	0.0	0.0	125.0	31.25
-37.5	125.0	125.0	125.0	125.0	93.75	62.5	0.0
-125.0	125.0	62.5	62.5	62.5	62.5	0.0	0.0
-62.5	125.0	93.75	0.0	93.75	62.5	62.5	62.5
-37.5	125.0	93.75	62.5	93.75	0.0	93.75	0.0
-125.0	125.0	62.5	62.5	93.75	93.75	93.75	125.0
-37.5	125.0	0.0	93.75	125.0	125.0	62.5	0.0
-0.0	125.0	31.25	0.0	0.0	0.0	93.75	0.0
-37.5	125.0	62.5	31.25	0.0	93.75	93.75	62.5
-12.5	125.0	31.25	62.5	125.0	125.0	125.0	62.5
-12.5	125.0	62.5	62.5	31.25	125.0	125.0	125.0
-125.0	125.0	0.0	125.0	31.25	62.5	93.75	31.25
-12.5	125.0	31.25	0.0	62.5	93.75	125.0	93.75
-62.5	125.0	0.0	125.0	0.0	31.25	125.0	31.25
-12.5	125.0	0.0	93.75	62.5	93.75	0.0	93.75
-0.0	125.0	62.5	125.0	62.5	125.0	0.0	125.0
-62.5	125.0	31.25	125.0	62.5	31.25	0.0	93.75
-37.5	125.0	0.0	62.5	0.0	62.5	62.5	31.25
-62.5	125.0	0.0	0.0	93.75	31.25	62.5	0.0
-12.5	125.0	0.0	93.75	0.0	62.5	31.25	31.25
-0.0	125.0	62.5	0.0	31.25	62.5	31.25	31.25
-125.0	125.0	0.0	125.0	125.0	31.25	62.5	62.5
-0.0	125.0	31.25	31.25	125.0	31.25	125.0	31.25
-12.5	125.0	31.25	0.0	125.0	0.0	62.5	93.75
-125.0	125.0	62.5	31.25	62.5	93.75	0.0	62.5
-37.5	125.0	125.0	62.5	0.0	0.0	125.0	0.0
-125.0	125.0	93.75	31.25	93.75	125.0	0.0	0.0
-0.0	125.0	62.5	31.25	0.0	62.5	93.75	62.5
-37.5	125.0	125.0	93.75	93.75	62.5	62.5	93.75
-12.5	125.0	31.25	62.5	0.0	0.0	0.0	93.75
-125.0	125.0	31.25	125.0	93.75	0.0	31.25	0.0
-62.5	125.0	93.75	0.0	62.5	125.0	31.25	125.0
-12.5	125.0	0.0	62.5	31.25	31.25	31.25	93.75
-62.5	125.0	93.75	31.25	125.0	125.0	62.5	125.0
-0.0	125.0	62.5	93.75	125.0	93.75	62.5	31.25
-37.5	125.0	93.75	93.75	62.5	31.25	0.0	0.0
-37.5	125.0	93.75	125.0	0.0	0.0	93.75	0.0
-0.0	125.0	62.5	0.0	31.25	93.75	93.75	0.0
-125.0	125.0	125.0	31.25	31.25	125.0	31.25	93.75
-62.5	125.0	125.0	93.75	31.25	31.25	0.0	125.0
-0.0	125.0	62.5	125.0	93.75	93.75	0.0	31.25
-37.5	125.0	31.25	31.25	0.0	62.5	62.5	0.0
-12.5	125.0	0.0	0.0	31.25	93.75	62.5	125.0
-62.5	125.0	0.0	125.0	125.0	93.75	93.75	0.0
-0.0	125.0	93.75	93.75	31.25	125.0	0.0	62.5
-125.0	125.0	0.0	0.0	93.75	31.25	31.25	62.5
-37.5	125.0	125.0	31.25	93.75	0.0	93.75	93.75
-62.5	125.0	31.25	0.0	93.75	31.25	125.0	0.0
-0.0	125.0	62.5	62.5	62.5	31.25	31.25	93.75
-37.5	125.0	125.0	62.5	62.5	0.0	93.75	62.5
-62.5	125.0	62.5	125.0	62.5	125.0	31.25	62.5
-125.0	125.0	0.0	31.25	125.0	93.75	93.75	31.25
-37.5	125.0	62.5	125.0	62.5	62.5	31.25	62.5
-12.5	125.0	0.0	31.25	0.0	62.5	62.5	125.0
-12.5	125.0	93.75	93.75	31.25	125.0	125.0	125.0
-12.5	125.0	93.75	93.75	31.25	31.25	31.25	93.75
-62.5	125.0	0.0	31.25	31.25	31.25	125.0	62.5
-37.5	125.0	31.25	93.75	125.0	62.5	0.0	62.5
-0.0	125.0	125.0	125.0	0.0	62.5	125.0	125.0
-62.5	125.0	31.25	125.0	0.0	31.25	93.75	31.25
-125.0	125.0	93.75	125.0	125.0	125.0	31.25	62.5
-12.5	125.0	62.5	31.25	62.5	93.75	125.0	31.25
-12.5	125.0	0.0	125.0	93.75	0.0	31.25	31.25
-12.5	125.0	93.75	125.0	125.0	62.5	93.75	31.25
-0.0	125.0	93.75	93.75	62.5	31.25	0.0	125.0
-62.5	125.0	125.0	0.0	93.75	0.0	125.0	93.75
-0.0	125.0	0.0	0.0	31.25	62.5	0.0	62.5
-62.5	125.0	62.5	31.25	31.25	62.5	31.25	125.0
-62.5	125.0	125.0	93.75	31.25	0.0	0.0	93.75
-125.0	125.0	62.5	0.0	125.0	125.0	93.75	62.5
-125.0	125.0	31.25	125.0	0.0	31.25	93.75	62.5
-0.0	125.0	125.0	62.5	93.75	0.0	0.0	31.25
-125.0	125.0	125.0	31.25	62.5	0.0	0.0	62.5
-0.0	125.0	0.0	31.25	93.75	31.25	62.5	31.25
-125.0	125.0	93.75	93.75	93.75	93.75	62.5	125.0
-0.0	125.0	125.0	31.25	62.5	0.0	62.5	125.0
-12.5	125.0	93.75	62.5	0.0	125.0	93.75	93.75
-12.5	125.0	125.0	0.0	125.0	62.5	0.0	62.5
-37.5	125.0	31.25	93.75	0.0	125.0	0.0	125.0
-0.0	125.0	93.75	0.0	62.5	125.0	31.25	125.0
-62.5	125.0	125.0	93.75	125.0	31.25	125.0	0.0
-125.0	125.0	93.75	62.5	62.5	0.0	125.0	125.0
-62.5	125.0	93.75	62.5	31.25	93.75	31.25	125.0
-37.5	125.0	31.25	0.0	93.75	93.75	125.0	93.75
-0.0	125.0	0.0	125.0	31.25	93.75	125.0	31.25
-62.5	125.0	125.0	31.25	62.5	62.5	62.5	0.0
-62.5	125.0	62.5	93.75	93.75	31.25	93.75	0.0
-62.5	125.0	93.75	62.5	31.25	0.0	125.0	93.75
-12.5	125.0	31.25	0.0	0.0	0.0	93.75	93.75
-12.5	125.0	125.0	62.5	125.0	93.75	62.5	31.25
-125.0	125.0	125.0	125.0	0.0	93.75	31.25	31.25
-125.0	125.0	62.5	62.5	0.0	125.0	0.0	0.0
+Hela lysate,Access prot 50%,Reaction mix,RNA 1ug/uL
+492.5,25.0,310.0,152.5
+970.0,165.0,257.5,112.5
+537.5,325.0,192.5,185.0
diff -r 645d10db2819 -r e0d146e3010d test-data/sampler/output/sampling.test-2.tsv
--- a/test-data/sampler/output/sampling.test-2.tsv	Wed Feb 14 15:24:27 2024 +0000
+++ b/test-data/sampler/output/sampling.test-2.tsv	Tue Jul 23 09:30:52 2024 +0000
@@ -1,101 +1,5 @@
-Component_1	Component_2	Component_3	Component_4	Component_5	Component_6	Component_7	Component_8
-62.5	125.0	25.0	50.0	50.0	25.0	25.0	37.5
-0.0	125.0	25.0	37.5	25.0	50.0	37.5	25.0
-125.0	125.0	25.0	25.0	37.5	25.0	50.0	50.0
-12.5	125.0	25.0	25.0	50.0	37.5	37.5	25.0
-37.5	125.0	25.0	25.0	37.5	37.5	50.0	37.5
-62.5	125.0	25.0	37.5	25.0	25.0	37.5	25.0
-37.5	125.0	50.0	25.0	50.0	50.0	37.5	25.0
-62.5	125.0	37.5	50.0	37.5	50.0	37.5	37.5
-125.0	125.0	37.5	50.0	25.0	50.0	25.0	50.0
-37.5	125.0	50.0	37.5	50.0	50.0	25.0	37.5
-62.5	125.0	50.0	37.5	25.0	25.0	25.0	25.0
-12.5	125.0	25.0	37.5	37.5	37.5	37.5	37.5
-0.0	125.0	25.0	50.0	37.5	37.5	37.5	37.5
-0.0	125.0	37.5	25.0	50.0	50.0	50.0	37.5
-62.5	125.0	50.0	25.0	37.5	50.0	50.0	25.0
-37.5	125.0	25.0	50.0	37.5	50.0	37.5	25.0
-125.0	125.0	37.5	50.0	50.0	50.0	25.0	25.0
-62.5	125.0	37.5	50.0	37.5	37.5	25.0	37.5
-12.5	125.0	25.0	50.0	25.0	50.0	50.0	25.0
-125.0	125.0	25.0	37.5	50.0	50.0	25.0	50.0
-62.5	125.0	25.0	25.0	37.5	25.0	37.5	50.0
-62.5	125.0	50.0	25.0	37.5	25.0	50.0	50.0
-12.5	125.0	25.0	50.0	37.5	25.0	25.0	50.0
-12.5	125.0	37.5	25.0	25.0	50.0	50.0	25.0
-125.0	125.0	25.0	25.0	37.5	25.0	37.5	37.5
-0.0	125.0	50.0	37.5	37.5	37.5	25.0	37.5
-62.5	125.0	50.0	37.5	37.5	50.0	25.0	37.5
-125.0	125.0	50.0	25.0	50.0	37.5	50.0	50.0
-125.0	125.0	37.5	25.0	25.0	25.0	37.5	25.0
-12.5	125.0	50.0	50.0	50.0	25.0	37.5	50.0
-125.0	125.0	25.0	37.5	25.0	25.0	50.0	50.0
-62.5	125.0	37.5	37.5	25.0	50.0	37.5	37.5
-62.5	125.0	50.0	50.0	37.5	37.5	25.0	25.0
-0.0	125.0	37.5	37.5	25.0	25.0	50.0	50.0
-0.0	125.0	50.0	37.5	37.5	37.5	37.5	50.0
-37.5	125.0	25.0	37.5	50.0	37.5	37.5	37.5
-37.5	125.0	25.0	25.0	37.5	50.0	50.0	50.0
-62.5	125.0	37.5	37.5	50.0	50.0	50.0	37.5
-125.0	125.0	37.5	25.0	50.0	37.5	50.0	50.0
-37.5	125.0	50.0	50.0	50.0	37.5	25.0	25.0
-12.5	125.0	37.5	50.0	25.0	37.5	50.0	25.0
-0.0	125.0	25.0	50.0	25.0	25.0	37.5	50.0
-62.5	125.0	50.0	50.0	50.0	37.5	50.0	37.5
-12.5	125.0	25.0	37.5	50.0	50.0	25.0	37.5
-12.5	125.0	50.0	25.0	37.5	25.0	37.5	50.0
-37.5	125.0	25.0	25.0	37.5	50.0	37.5	50.0
-0.0	125.0	25.0	37.5	25.0	37.5	25.0	25.0
-62.5	125.0	50.0	25.0	37.5	37.5	25.0	25.0
-12.5	125.0	50.0	50.0	50.0	37.5	37.5	25.0
-37.5	125.0	37.5	37.5	37.5	37.5	25.0	37.5
-37.5	125.0	50.0	25.0	37.5	25.0	25.0	25.0
-37.5	125.0	37.5	37.5	25.0	50.0	25.0	37.5
-62.5	125.0	25.0	37.5	37.5	37.5	50.0	25.0
-125.0	125.0	25.0	25.0	25.0	25.0	50.0	37.5
-37.5	125.0	37.5	50.0	50.0	25.0	50.0	25.0
-125.0	125.0	37.5	25.0	25.0	37.5	50.0	25.0
-37.5	125.0	50.0	50.0	37.5	50.0	37.5	37.5
-12.5	125.0	25.0	25.0	37.5	25.0	37.5	25.0
-37.5	125.0	37.5	50.0	37.5	37.5	25.0	50.0
-125.0	125.0	37.5	25.0	50.0	25.0	37.5	50.0
-0.0	125.0	25.0	25.0	50.0	25.0	25.0	37.5
-125.0	125.0	50.0	50.0	50.0	37.5	37.5	50.0
-37.5	125.0	25.0	37.5	37.5	25.0	50.0	50.0
-12.5	125.0	50.0	25.0	37.5	37.5	37.5	50.0
-0.0	125.0	50.0	50.0	50.0	25.0	50.0	25.0
-125.0	125.0	37.5	37.5	50.0	50.0	25.0	50.0
-0.0	125.0	37.5	50.0	25.0	25.0	50.0	37.5
-0.0	125.0	25.0	50.0	25.0	25.0	25.0	50.0
-62.5	125.0	37.5	25.0	50.0	37.5	50.0	37.5
-0.0	125.0	50.0	25.0	25.0	25.0	50.0	50.0
-37.5	125.0	50.0	50.0	25.0	50.0	50.0	50.0
-12.5	125.0	37.5	50.0	25.0	50.0	25.0	37.5
-12.5	125.0	50.0	37.5	37.5	37.5	50.0	37.5
-37.5	125.0	50.0	37.5	50.0	37.5	37.5	50.0
-0.0	125.0	50.0	50.0	50.0	50.0	37.5	25.0
-37.5	125.0	50.0	25.0	50.0	25.0	25.0	25.0
-37.5	125.0	50.0	37.5	50.0	37.5	37.5	25.0
-12.5	125.0	25.0	25.0	50.0	37.5	25.0	50.0
-12.5	125.0	25.0	25.0	25.0	50.0	50.0	25.0
-12.5	125.0	50.0	25.0	37.5	25.0	50.0	25.0
-0.0	125.0	37.5	50.0	25.0	37.5	37.5	37.5
-62.5	125.0	37.5	37.5	50.0	25.0	25.0	37.5
-0.0	125.0	37.5	37.5	25.0	50.0	37.5	37.5
-125.0	125.0	25.0	25.0	37.5	50.0	25.0	25.0
-62.5	125.0	50.0	50.0	50.0	37.5	25.0	50.0
-62.5	125.0	25.0	37.5	25.0	25.0	25.0	37.5
-12.5	125.0	50.0	25.0	25.0	50.0	50.0	25.0
-62.5	125.0	25.0	37.5	37.5	25.0	50.0	25.0
-0.0	125.0	37.5	50.0	25.0	25.0	25.0	50.0
-125.0	125.0	50.0	37.5	25.0	25.0	37.5	25.0
-0.0	125.0	37.5	37.5	25.0	50.0	50.0	37.5
-125.0	125.0	37.5	37.5	25.0	37.5	50.0	50.0
-0.0	125.0	50.0	50.0	50.0	25.0	50.0	50.0
-12.5	125.0	37.5	25.0	50.0	50.0	25.0	25.0
-125.0	125.0	25.0	37.5	37.5	37.5	37.5	37.5
-12.5	125.0	37.5	50.0	50.0	50.0	25.0	37.5
-37.5	125.0	37.5	37.5	25.0	37.5	25.0	50.0
-0.0	125.0	25.0	50.0	25.0	50.0	37.5	37.5
-125.0	125.0	25.0	50.0	25.0	25.0	37.5	50.0
-0.0	125.0	50.0	50.0	37.5	25.0	37.5	37.5
+Hela lysate,Access prot 50%,Reaction mix,RNA 1ug/uL
+610.7,403.0,378.2,52.7
+666.5,384.40000000000003,282.1,111.60000000000001
+62.0,319.3,170.5,52.7
+409.2,238.70000000000002,399.90000000000003,37.2