Mercurial > repos > tduigou > doe_synbio_sampler

diff sampler.xml @ 4:d69cb64336e7 draft

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planemo upload for repository ['https://github.com/brsynth/icfree-ml', 'https://github.com/pablocarb/doebase'] commit 537d7fefe58984b8f7ca66010153a2fdc35ddf4b
author tduigou
date Wed, 14 Feb 2024 15:24:19 +0000
parents 0111a6eb7b98
children 5e7468a35380
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line diff
--- a/sampler.xml	Mon Jul 03 10:38:35 2023 +0000
+++ b/sampler.xml	Wed Feb 14 15:24:19 2024 +0000
@@ -2,7 +2,7 @@
     <description>Generate data points using latin hypercube sampling (LHS)</description>
     <macros>
         <import>macros.xml</import>
-        <token name="@TOOL_VERSION@">2.1.1</token>
+        <token name="@TOOL_VERSION@">2.2.0</token>
     </macros>
     <requirements>
         <requirement type="package" version="@TOOL_VERSION@">icfree</requirement>
@@ -53,21 +53,20 @@
     <tests>
         <!-- test 1: check if identical outputs are produced with default parameters  -->
         <test>
-            <param name="cfps_file" value="converter_proCFPS_parameters.tsv" />
+            <param name="cfps_file" value="sampler/input/parameters.tsv" />
             <param name="seed_param" value="not_random" />
             <param name="seed" value="0" />
-            <output name="output_sampling" file="sampler_sampling.test-1.tsv" ftype="tabular" compare="diff" />
+            <output name="output_sampling" file="sampler/output/sampling.test-1.tsv" ftype="tabular" compare="diff" />
         </test>
         <!-- test 2: advanced arguments -->
         <test>
-            <param name="cfps_file" value="converter_proCFPS_parameters.tsv" />
+            <param name="cfps_file" value="sampler/input/parameters.tsv" />
             <param name="nb_sampling_steps" value="3" />
             <param name="nb_samples" value="100" />
             <param name="sampling_ratio" value="0.4 0.2 0.3" />
             <param name="seed_param" value="not_random" />
             <param name="seed" value="0" />
-            <param name="nb_samples" value="100" />
-            <output name="output_sampling" file="sampler_sampling.test-2.tsv" ftype="tabular" compare="diff" />
+            <output name="output_sampling" file="sampler/output/sampling.test-2.tsv" ftype="tabular" compare="diff" />
         </test>
     </tests>
     <help><![CDATA[