Mercurial > repos > tduigou > icfree_plates_designer

changeset 3:7f48894f0239 draft

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planemo upload for repository https://github.com/brsynth/icfree-ml commit b669b043a7cd633a9ba1ac2cf2a7f3ed09c3e92e-dirty
author tduigou
date Tue, 10 Sep 2024 14:54:37 +0000
parents de3f030fa572
children 5d3a54198bf9
files test-data/instructor.hela.test-2.csv test-data/instructor.test-1.csv test-data/instructor.test-2.csv
diffstat 3 files changed, 20 insertions(+), 112 deletions(-) [+]
line wrap: on
line diff
--- a/test-data/instructor.hela.test-2.csv	Tue Sep 10 13:42:51 2024 +0000
+++ b/test-data/instructor.hela.test-2.csv	Tue Sep 10 14:54:37 2024 +0000
@@ -1,11 +1,7 @@
 Source Plate Name,Source Plate Type,Source Well,Destination Plate Name,Destination Well,Transfer Volume,Sample ID
 Source[1],384PP_AQ_CP,{A1;B1},Destination[1],A1,492.5,Hela lysate
-Source[1],384PP_AQ_CP,{A1;B1},Destination[1],B1,500.0,Hela lysate
-Source[1],384PP_AQ_CP,{A1;B1},Destination[1],B1,470.0,Hela lysate
-Source[1],384PP_AQ_CP,{A1;B1},Destination[1],C1,500.0,Hela lysate
-Source[1],384PP_AQ_CP,{A1;B1},Destination[1],C1,37.5,Hela lysate
+Source[1],384PP_AQ_CP,{A1;B1},Destination[1],B1,970.0,Hela lysate
+Source[1],384PP_AQ_CP,{A1;B1},Destination[1],C1,537.5,Hela lysate
 Source[1],384PP_AQ_CP,{A1;B1},Destination[1],D1,492.5,Hela lysate
-Source[1],384PP_AQ_CP,{A1;B1},Destination[1],E1,500.0,Hela lysate
-Source[1],384PP_AQ_CP,{A1;B1},Destination[1],E1,470.0,Hela lysate
-Source[1],384PP_AQ_CP,{A1;B1},Destination[1],F1,500.0,Hela lysate
-Source[1],384PP_AQ_CP,{A1;B1},Destination[1],F1,37.5,Hela lysate
+Source[1],384PP_AQ_CP,{A1;B1},Destination[1],E1,970.0,Hela lysate
+Source[1],384PP_AQ_CP,{A1;B1},Destination[1],F1,537.5,Hela lysate
--- a/test-data/instructor.test-1.csv	Tue Sep 10 13:42:51 2024 +0000
+++ b/test-data/instructor.test-1.csv	Tue Sep 10 14:54:37 2024 +0000
@@ -6,15 +6,11 @@
 Source[1],384PP_AQ_GP3,C1,Destination[1],E1,165.0,Access prot 50%
 Source[1],384PP_AQ_GP3,C1,Destination[1],F1,325.0,Access prot 50%
 Source[1],384PP_AQ_GP3,{A1;B1},Destination[1],A1,492.5,Hela lysate
-Source[1],384PP_AQ_GP3,{A1;B1},Destination[1],B1,500.0,Hela lysate
-Source[1],384PP_AQ_GP3,{A1;B1},Destination[1],B1,470.0,Hela lysate
-Source[1],384PP_AQ_GP3,{A1;B1},Destination[1],C1,500.0,Hela lysate
-Source[1],384PP_AQ_GP3,{A1;B1},Destination[1],C1,37.5,Hela lysate
+Source[1],384PP_AQ_GP3,{A1;B1},Destination[1],B1,970.0,Hela lysate
+Source[1],384PP_AQ_GP3,{A1;B1},Destination[1],C1,537.5,Hela lysate
 Source[1],384PP_AQ_GP3,{A1;B1},Destination[1],D1,492.5,Hela lysate
-Source[1],384PP_AQ_GP3,{A1;B1},Destination[1],E1,500.0,Hela lysate
-Source[1],384PP_AQ_GP3,{A1;B1},Destination[1],E1,470.0,Hela lysate
-Source[1],384PP_AQ_GP3,{A1;B1},Destination[1],F1,500.0,Hela lysate
-Source[1],384PP_AQ_GP3,{A1;B1},Destination[1],F1,37.5,Hela lysate
+Source[1],384PP_AQ_GP3,{A1;B1},Destination[1],E1,970.0,Hela lysate
+Source[1],384PP_AQ_GP3,{A1;B1},Destination[1],F1,537.5,Hela lysate
 Source[1],384PP_AQ_GP3,E1,Destination[1],A1,152.5,RNA 1ug/uL
 Source[1],384PP_AQ_GP3,E1,Destination[1],B1,112.5,RNA 1ug/uL
 Source[1],384PP_AQ_GP3,E1,Destination[1],C1,185.0,RNA 1ug/uL
@@ -27,51 +23,9 @@
 Source[1],384PP_AQ_GP3,D1,Destination[1],D1,310.0,Reaction mix
 Source[1],384PP_AQ_GP3,D1,Destination[1],E1,257.5,Reaction mix
 Source[1],384PP_AQ_GP3,D1,Destination[1],F1,192.5,Reaction mix
-Source[1],384PP_AQ_GP3,F1,Destination[1],A1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],A1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],A1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],A1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],A1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],A1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],A1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],A1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],A1,20.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],B1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],B1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],B1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],B1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],B1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],B1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],B1,495.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],C1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],C1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],C1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],C1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],C1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],C1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],C1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],C1,260.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],D1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],D1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],D1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],D1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],D1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],D1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],D1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],D1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],D1,20.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],E1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],E1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],E1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],E1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],E1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],E1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],E1,495.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],F1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],F1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],F1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],F1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],F1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],F1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],F1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],F1,260.0,Water
+Source[1],384PP_AQ_GP3,F1,Destination[1],A1,4020.0,Water
+Source[1],384PP_AQ_GP3,F1,Destination[1],B1,3495.0,Water
+Source[1],384PP_AQ_GP3,F1,Destination[1],C1,3760.0,Water
+Source[1],384PP_AQ_GP3,F1,Destination[1],D1,4020.0,Water
+Source[1],384PP_AQ_GP3,F1,Destination[1],E1,3495.0,Water
+Source[1],384PP_AQ_GP3,F1,Destination[1],F1,3760.0,Water
--- a/test-data/instructor.test-2.csv	Tue Sep 10 13:42:51 2024 +0000
+++ b/test-data/instructor.test-2.csv	Tue Sep 10 14:54:37 2024 +0000
@@ -17,51 +17,9 @@
 Source[1],384PP_AQ_GP3,D1,Destination[1],D1,310.0,Reaction mix
 Source[1],384PP_AQ_GP3,D1,Destination[1],E1,257.5,Reaction mix
 Source[1],384PP_AQ_GP3,D1,Destination[1],F1,192.5,Reaction mix
-Source[1],384PP_AQ_GP3,F1,Destination[1],A1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],A1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],A1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],A1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],A1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],A1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],A1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],A1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],A1,20.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],B1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],B1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],B1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],B1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],B1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],B1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],B1,495.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],C1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],C1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],C1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],C1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],C1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],C1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],C1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],C1,260.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],D1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],D1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],D1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],D1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],D1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],D1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],D1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],D1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],D1,20.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],E1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],E1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],E1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],E1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],E1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],E1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],E1,495.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],F1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],F1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],F1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],F1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],F1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],F1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],F1,500.0,Water
-Source[1],384PP_AQ_GP3,F1,Destination[1],F1,260.0,Water
+Source[1],384PP_AQ_GP3,F1,Destination[1],A1,4020.0,Water
+Source[1],384PP_AQ_GP3,F1,Destination[1],B1,3495.0,Water
+Source[1],384PP_AQ_GP3,F1,Destination[1],C1,3760.0,Water
+Source[1],384PP_AQ_GP3,F1,Destination[1],D1,4020.0,Water
+Source[1],384PP_AQ_GP3,F1,Destination[1],E1,3495.0,Water
+Source[1],384PP_AQ_GP3,F1,Destination[1],F1,3760.0,Water